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Series GSE202740 Query DataSets for GSE202740
Status Public on May 30, 2023
Title Schwann Cells Shape Tumor Cells and Cancer-Associated Fibroblasts in the Pancreatic Ductal Adenocarcinoma Microenvironment [ST]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Neuropathy is a feature more frequently observed in pancreatic ductal adenocarcinoma (PDAC) than other tumors. Schwann cells, the most prevalent cell in peripheral nerves, migrate toward tumor cells and associate with poor prognosis in PDAC. To unveil the effects of Schwann cells on the neuro-stroma niche, single-cell RNA-sequencing and microarray-based spatial transcriptome analysis of PDAC tissues were performed. Results suggested that Schwann cells may drive tumor cells and cancer-associated fibroblasts (CAFs) to more malignant subtypes: basal-like and inflammatory CAFs (iCAFs), respectively. Moreover, in vitro and in vivo assays demonstrated that Schwann cells enhanced the proliferation and migration of PDAC cells via Midkine and promoted the switch of CAFs to iCAFs via interleukin-1a. By Schwann cells condition medium, tumor cells together with iCAFs accelerate PDAC progression. Thus, we revealed, for the first time, that Schwann cells induce malignant subtypes of tumor cells and CAFs in the PDAC milieu.
 
Overall design spatial transcriptome was performed in 4 PDAC patient tumor samples with neuropathy.
 
Contributor(s) Xue M, Zhu Y, Jiang Y, Han L, Shi M, Su R, Wang L, Xiong C, Wang C, Wang T, Wu D, Cao Y, Dong L, Bai F, Zhao S, Deng X, Peng C, Li H, Chen J, Shen B, Jiang L, Chen H
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Submission date May 11, 2022
Last update date May 31, 2023
Contact name Meilin Xue
E-mail(s) xuemeilin@sjtu.edu.cn
Organization name Ruijin Hospital, Shanghai Jiao Tong University School of Medicine
Street address 197 Ruijin 2nd Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200020
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM6132061 ST_PDAC-1
GSM6132062 ST_PDAC-2
GSM6132063 ST_PDAC-3
Relations
BioProject PRJNA837200

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Supplementary file Size Download File type/resource
GSE202740_RAW.tar 1017.0 Mb (http)(custom) TAR (of MTX, TIFF, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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