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Series GSE203098 Query DataSets for GSE203098
Status Public on Dec 28, 2022
Title BCG-activation of lymphocytes for the generation of donor-independent innate anti-tumor NK and γδ T cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary We performed scRNA-seq to PBMCs incubated with 2 different sub-strains of BCG during 7 days. We found that iBCG co-cultures potently stimulated the proliferation of TRDV2 gamma-delta T cells, while Oncotice did not have the ability to expand this subpopulation, and mainly stimulated NK and classical T cells.
 
Overall design mRNA profiles of paired PBMC samples from 3 healthy donors (treated with iBCG or Oncotice) were examined
 
Contributor(s) Esteso G, Felgueres MJ, García-Jiménez Á, Reyburn H, Puentes E, Murillo I, Rodríguez E, Valés-Gómez M, Vázquez de Luis E
Citation(s) 36567803
Submission date May 16, 2022
Last update date Dec 28, 2022
Contact name Enrique Vazquez de Luis
E-mail(s) quiquevzquez@gmail.com
Organization name CNIC
Lab Genomics Unit
Street address Melchor Fernandez Almagro, 3
City Madrid
State/province Madrid
ZIP/Postal code 28029
Country Spain
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (4)
GSM6153768 iBCG (IBCG)_GEX
GSM6153769 iBCG (IBCG)_HTO
GSM6153770 Oncotice (oncoT)_GEX
Relations
BioProject PRJNA838573

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE203098_IBCG_barcodes.tsv.gz 41.1 Kb (ftp)(http) TSV
GSE203098_IBCG_features.tsv.gz 325.7 Kb (ftp)(http) TSV
GSE203098_IBCG_matrix.mtx.gz 61.3 Mb (ftp)(http) MTX
GSE203098_OncoT_barcodes.tsv.gz 53.8 Kb (ftp)(http) TSV
GSE203098_OncoT_features.tsv.gz 325.7 Kb (ftp)(http) TSV
GSE203098_OncoT_matrix.mtx.gz 66.3 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record

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