NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE203178 Query DataSets for GSE203178
Status Public on May 20, 2022
Title RNA deep sequencing data of the whole transcriptomes of the wild-type and crp2 (MSMEG_0539) mutant strains of Mycobacterium smegmatis MC2 155
Organism Mycolicibacterium smegmatis
Experiment type Expression profiling by high throughput sequencing
Summary Our comparative RNA sequencing analysis of the wild-type strain of M. smegmatis and its isogenic crp2 (MSMEG_0539) mutant strain lacking the cAMP receptor protein 2 revealed Crp2 regulon in the M. smegmatis
 
Overall design Comparison of gene expression between the wild-type and crp2 (MSMEG_0539) mutant strains of Mycobacterium smegmatis that are aerobically grown.
 
Contributor(s) Oh J, Ko E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 17, 2022
Last update date May 22, 2022
Contact name Eon-Min Ko
E-mail(s) koeonmin@pusan.ac.kr
Organization name Pusan national university
Street address pusandaehak-ro
City Pusan
ZIP/Postal code 46241
Country South Korea
 
Platforms (1)
GPL28938 Illumina HiSeq 4000 (Mycolicibacterium smegmatis)
Samples (6)
GSM6161231 MC2 155_WT_rep1
GSM6161232 MC2 155_WT_rep2
GSM6161233 MC2 155_WT_rep3
Relations
BioProject PRJNA838962

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE203178_RAW.tar 760.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap