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| Status |
Public on Feb 18, 2010 |
| Title |
Binding site turnover produces pervasive quantitative changes in TF binding between closely related Drosophila species |
| Organisms |
Drosophila melanogaster; Drosophila yakuba |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
[original title] Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species.
We demonstrate extensive quantitative changes in binding of six factors that control early embryonic patterning between two closely related Drosophila species
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| |
|
| Overall design |
ChIP-Seq based binding measurements of six transcription factors in embryos of two Drosophila species, D.melanogaster and D.yakuba.
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| |
|
| Contributor(s) |
Bradley RK, Li X, Eisen MB |
| Citation(s) |
20351773, 22247430 |
| |
| Submission date |
Feb 17, 2010 |
| Last update date |
Aug 11, 2017 |
| Contact name |
Michael Eisen |
| E-mail(s) |
mbeisen@berkeley.edu
|
| Phone |
510-666-3639
|
| Organization name |
University of California, Berkeley
|
| Department |
Molecular and Cell Biology
|
| Lab |
Eisen Lab
|
| Street address |
Stanley Hall 304B
|
| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL9061 |
Illumina Genome Analyzer II (Drosophila melanogaster) |
| GPL10061 |
Illumina Genome Analyzer II (Drosophila yakuba) |
|
| Samples (20)
|
|
| Relations |
| BioProject |
PRJNA125469 |
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