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Series GSE20369 Query DataSets for GSE20369
Status Public on Feb 18, 2010
Title Binding site turnover produces pervasive quantitative changes in TF binding between closely related Drosophila species
Organisms Drosophila melanogaster; Drosophila yakuba
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary [original title] Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species.
We demonstrate extensive quantitative changes in binding of six factors that control early embryonic patterning between two closely related Drosophila species
Overall design ChIP-Seq based binding measurements of six transcription factors in embryos of two Drosophila species, D.melanogaster and D.yakuba.
Contributor(s) Bradley RK, Li X, Eisen MB
Citation(s) 20351773, 22247430
Submission date Feb 17, 2010
Last update date Aug 11, 2017
Contact name Michael Eisen
Phone 510-666-3639
Organization name University of California, Berkeley
Department Molecular and Cell Biology
Lab Eisen Lab
Street address Stanley Hall 304B
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
Platforms (2)
GPL9061 Illumina Genome Analyzer II (Drosophila melanogaster)
GPL10061 Illumina Genome Analyzer II (Drosophila yakuba)
Samples (20)
GSM511081 Dmel-HB1_ChIP-Seq
GSM511082 Dmel-HB2_ChIP-Seq
GSM511083 Dmel-BCD_ChIP-Seq
BioProject PRJNA125469

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20369_RAW.tar 1.9 Gb (http)(custom) TAR (of GFF, TXT)
Processed data provided as supplementary file

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