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Series GSE20447 Query DataSets for GSE20447
Status Public on May 30, 2010
Title Neuronal microRNA response to Alzheimer's disease amyloid beta
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Mus musculus
Experiment type Other
Summary In neurodegenerative disorders such as Alzheimer’s disease (AD), brain miRNA profiles are altered; thus miRNA dysfunction could be both a cause and a consequence of disease. Our study dissects the complexity of human AD pathology, in the absence of a post mortem delay, and provides the first miRNA profiling analysis addressing the contribution of amyloid-β (Aβ), a known causative factor of AD, to the de-regulation of neuronal miRNA expression. We used murine primary hippocampal neurons to show that Aβ is a powerful regulator of mature miRNA expression and a prominent miRNA down-regulation is evoked in response to Aβ peptides. Our study provides insight into a previously unexplored mechanism of how Aβ may impact the pathology of AD and identification of key miRNAs affected by Aβ will allow further analysis on target genes and biological pathways contributing to AD pathomechanisms.
 
Overall design Mouse primary hippocampal neurons were grown for 23 DIV before being treated for 24 hours with either 5uM amyloid beta (1-42) aged for 24 hours at 37 degrees with shaking, or a PBS control. Total RNA was extracted using the Qiagen miRNeasy Kit and expression of 380 microRNA was analysed using rodent TaqMan low density microRNA microarrays (Applied Biosystems).
 
Contributor(s) Schonrock N, Gotz J
Citation(s) 20552018
Submission date Feb 22, 2010
Last update date Mar 22, 2012
Contact name Nicole Schonrock
E-mail(s) nschonrock@med.usyd.edu.au
Phone +61 2 93510873
Organization name Brain and Mind Research Institute, University of Sydney
Department Medicine
Lab Alzheimer's and Parkinson's Disease laboratory
Street address 100 mallett street
City Camperdown
State/province New South Wales
ZIP/Postal code 2050
Country Australia
 
Platforms (1)
GPL10086 Applied Biosystems Human and Rodent TaqMan Low Denisty microRNA Microarray
Samples (1)
GSM512701 Abeta treated vs. Control
Relations
BioProject PRJNA125103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20447_RAW.tar 70.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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