|
| Status |
Public on Apr 22, 2010 |
| Title |
Arabidopsis thaliana and Arabidopsis lyrata degradomes |
| Organisms |
Arabidopsis thaliana; Arabidopsis lyrata |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Deep sequencing of the 5' ends of uncapped, polyA-enriched mRNA from two biological replicate samples from Arabidopsis thaliana inflorescences, as well as two biological replicates of Arabidopsis lyrata inflorescences. These data were used to experimentally identify sliced microRNA targets from the two species.
|
| |
|
| Overall design |
Two biological replicate samples of the 5' ends of uncapped, polyA+ RNAs from both A. thaliana and A. lyrata
|
| |
|
| Contributor(s) |
Ma Z, Coruh C, Axtell MJ |
| Citation(s) |
20407023 |
| |
| Submission date |
Feb 22, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Michael J Axtell |
| E-mail(s) |
mja18@psu.edu
|
| Organization name |
Pennsylvania State University
|
| Department |
Biology
|
| Lab |
Axtell
|
| Street address |
280 Mueller Lab
|
| City |
University Park |
| State/province |
PA |
| ZIP/Postal code |
16802 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL10082 |
AB SOLiD System 3.0 (Arabidopsis lyrata) |
| GPL10088 |
AB SOLiD System 3.0 (Arabidopsis thaliana) |
|
| Samples (4)
|
|
| Relations |
| SRA |
SRP002181 |
| BioProject |
PRJNA125109 |
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