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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 30, 2022 |
| Title |
Cytokines and lipid mediators of inflammation in lungs of SARS-CoV-2 infected mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We investigared the gene expression response of K18-ACE2 mices to Sars-Cov-2 infection. We compared gene expression profiles of control and infected mices at different time points as well as the infection from the Wuhan and Delta strains
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| Overall design |
Comparison of gene expression profiles between non-infected (control), Wuhan infected and Delta infected mices at days 5 and 7 past infection.
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| Contributor(s) |
Dubuc I, Prunier J, Lacasse É, Gravel A, Puhm F, Allaeys I, Archambault A, Gudimard L, Droit A, Flamand N, Boilard É, Flamand L |
| Citation(s) |
35812400 |
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| Submission date |
May 27, 2022 |
| Last update date |
Jul 15, 2022 |
| Contact name |
Julien Prunier |
| Organization name |
Université Laval
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| Department |
Forestry
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| Lab |
MacKay and Porth
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| Street address |
1030 av. de la medecine
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| City |
Quebec |
| State/province |
QC |
| ZIP/Postal code |
G1V 0A6 |
| Country |
Canada |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (24)
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| GSM6204139 |
Mus musculus,Lung,Wuhan – day5 – Rep4 |
| GSM6204140 |
Mus musculus,Lung,Wuhan – day5 – Rep5 |
| GSM6204141 |
Mus musculus,Lung,Wuhan – day7 – Rep1 |
| GSM6204142 |
Mus musculus,Lung,Wuhan – day7 – Rep2 |
| GSM6204143 |
Mus musculus,Lung,Wuhan – day7 – Rep3 |
| GSM6204144 |
Mus musculus,Lung,Wuhan – day7 – Rep5 |
| GSM6204145 |
Mus musculus,Lung,Wuhan – day7 – Rep4 |
| GSM6204146 |
Mus musculus,Lung,Delta – day5 – Rep1 |
| GSM6204147 |
Mus musculus,Lung,Delta – day7 – Rep1 |
| GSM6204148 |
Mus musculus,Lung,Delta – day7 – Rep2 |
| GSM6204149 |
Mus musculus,Lung,Delta – day7 – Rep3 |
| GSM6204150 |
Mus musculus,Lung,Delta – day7 – Rep4 |
| GSM6204151 |
Mus musculus,Lung,Delta – day7 – Rep5 |
| GSM6204152 |
Mus musculus,Lung,Delta – day5 – Rep2 |
| GSM6204153 |
Mus musculus,Lung,Delta – day5 – Rep3 |
| GSM6204154 |
Mus musculus,Lung,Delta – day5 – Rep4 |
| GSM6204155 |
Mus musculus,Lung,Delta – day5 – Rep5 |
| GSM6204156 |
Mus musculus,Lung,Control – Rep1 |
| GSM6204157 |
Mus musculus,Lung,Control – Rep2 |
| GSM6204158 |
Mus musculus,Lung,Control – Rep3 |
| GSM6204159 |
Mus musculus,Lung,Control – Rep4 |
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| Relations |
| BioProject |
PRJNA843076 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE205014_tpm.csv.gz |
4.8 Mb |
(ftp)(http) |
CSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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