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Status |
Public on Jul 04, 2023 |
Title |
A Micro-evolutionary Change in Target Binding Sites as a Key Determinant of Ultrabithorax Function in Drosophila |
Organism |
Drosophila melanogaster |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
We investigated the transcriptional profile in Drosophila wing and haltere imaginal discs to identify differentialy expressed genes between the two tissues.
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Overall design |
Whole RNA was isolated from wing and haltere imaginal discs dissected from Drosophila L3 larvae and libraries prepared using NEBNext® UltraTM Directional RNA Library Prep Kit. Sequencing was carried out on Illumina Hiseq platform using 150*2 paired end chemistry. All experiments were carried out on three independnt biological replicates. edgeR was used to identify differentially expressed genes.
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Contributor(s) |
Khan S, Shashidhara L |
Citation(s) |
37341745 |
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Submission date |
Jun 02, 2022 |
Last update date |
Jul 04, 2023 |
Contact name |
Soumen Khan |
E-mail(s) |
soumenkhan123@gmail.com
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Organization name |
Babraham Institute
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Department |
Epigenetics
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Street address |
Babraham Hall
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City |
Cambridge |
ZIP/Postal code |
CB22 3AT |
Country |
United Kingdom |
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Platforms (1) |
GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
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Samples (6)
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This SubSeries is part of SuperSeries: |
GSE205353 |
A Micro-evolutionary Change in Target Binding Sites as a Key Determinant of Ultrabithorax Function in Drosophila |
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Relations |
BioProject |
PRJNA844563 |