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Series GSE205352 Query DataSets for GSE205352
Status Public on Jul 04, 2023
Title A Micro-evolutionary Change in Target Binding Sites as a Key Determinant of Ultrabithorax Function in Drosophila
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We investigated the transcriptional profile in Drosophila wing and haltere imaginal discs to identify differentialy expressed genes between the two tissues.
 
Overall design Whole RNA was isolated from wing and haltere imaginal discs dissected from Drosophila L3 larvae and libraries prepared using NEBNext® UltraTM Directional RNA Library Prep Kit. Sequencing was carried out on Illumina Hiseq platform using 150*2 paired end chemistry. All experiments were carried out on three independnt biological replicates. edgeR was used to identify differentially expressed genes.
 
Contributor(s) Khan S, Shashidhara L
Citation(s) 37341745
Submission date Jun 02, 2022
Last update date Jul 04, 2023
Contact name Soumen Khan
E-mail(s) soumenkhan123@gmail.com
Organization name Babraham Institute
Department Epigenetics
Street address Babraham Hall
City Cambridge
ZIP/Postal code CB22 3AT
Country United Kingdom
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (6)
GSM6210828 Haltere Rep1
GSM6210829 Haltere Rep2
GSM6210830 Haltere Rep3
This SubSeries is part of SuperSeries:
GSE205353 A Micro-evolutionary Change in Target Binding Sites as a Key Determinant of Ultrabithorax Function in Drosophila
Relations
BioProject PRJNA844563

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205352_Diff_expressed_genes.txt.gz 158.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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