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Series GSE206208 Query DataSets for GSE206208
Status Public on Mar 03, 2023
Title Transcriptomic regulation of acidic biofilms by Candida albicans Sfl1
Organism Candida albicans
Experiment type Expression profiling by array
Summary Transcriptional profiling of Candida albicans cells grown under planktonic and biofilm-inducing conditions, comparing SN76 and sfl1Δ/sfl1Δ strains. Goal was to study the effect of SFL1 deletion on the transcriptomic profile of C. albicans planktonic and biofilm cells under acidic conditions, in order to reveal the function of the Sfl1 transcription factor in C. albicans biofilm development.
 
Overall design Candida albicans sfl1Δ and SN76 strains were cultivated in RPMI at pH 4 for 24 h under planktonic and biofilm-inducing conditions, and then the RNA was extracted from the cells and hybridised in a species-specific DNA microarray for C. albicans (sfl1Δ/sfl1Δvs. SN76)
Web link https://linkinghub.elsevier.com/retrieve/pii/S0300-9084(23)00011-1
 
Contributor(s) Gonçalves BF, Barbosa A, Soares AR, Henriques M, Silva S
Citation(s) 36669724
Submission date Jun 15, 2022
Last update date Mar 05, 2023
Contact name Ana Soares
E-mail(s) ana.r.soares@ua.pt
Organization name University of Aveiro
Street address Campus de Santiago
City Aveiro
ZIP/Postal code 3810
Country Portugal
 
Platforms (1)
GPL22275 Agilent-065138 8x15k C. albicans assembly 21 [Probe name version]
Samples (6)
GSM6246181 sfl1Δ_biofilm_vs_ SN76_biofilm_rep1
GSM6246182 sfl1Δ_biofilm_vs_ SN76_biofilm_rep2
GSM6246183 sfl1Δ_biofilm_vs_ SN76_biofilm_rep3
Relations
BioProject PRJNA849612

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206208_RAW.tar 9.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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