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Series GSE207804 Query DataSets for GSE207804
Status Public on Nov 29, 2022
Title Matrix from Urine Stem Cells Boosts Tissue-Specific Stem Cell Mediated Functional Cartilage Reconstruction
Organism Oryctolagus cuniculus
Experiment type Expression profiling by high throughput sequencing
Summary Articular cartilage has a limited capacity to self-heal once damaged. Tissue-specific stem cells are a solution for cartilage regeneration; however, ex vivo expansion resulting in cell senescence remains a challenge as a large quantity of high-quality tissue-specific stem cells are needed for cartilage regeneration. Our previous report demonstrated that decellularized extracellular matrix (dECM) deposited by human synovium-derived stem cells (SDSCs), adipose-derived stem cells (ADSCs), urine-derived stem cells (UDSCs), or dermal fibroblasts (DFs) provided a solution to rejuvenate human SDSCs in proliferation and chondrogenic potential. This study focused on the evaluation of ex vivo rejuvenation of rabbit infrapatellar fat pad-derived stem cells (IPFSCs) by the abovementioned dECMs to be used in functional cartilage repair in a rabbit osteochondral defect model and the potential cellular and molecular mechanisms underlying this rejuvenation. We found that dECM rejuvenation promoted rabbit IPFSCs’ cartilage engineering and functional regeneration in both in vitro and in vivo models, particularly for the dECM deposited by UDSCs, which was further confirmed by proteomics data. RNASeq analysis indicated that both mesenchymal-epithelial transition (MET) and inflammation-mediated macrophage activation and polarization are potentially involved in the dECM-mediated promotion of IPFSCs’ chondrogenic capacity, which needs further investigation.
 
Overall design Rabbit IPFSCs grown on four varied dECMs deposited by human ASCs, DFs, SDSCs, and USCs or tissue culture plastic (PL) were incubated in a pellet culture system with chondrogenic induction medium for 21 days. Both cell and pellet samples were used for RNASeq analyses.
 
Contributor(s) Pei M, Pei YA, Zhou S, Mikaeliagah E, Erickson C, Giertych B, Akhter H, Wang L, Stewart A, Parenti J, Wang B, Wen S, Sim S, Quenneville E, Hansen KC, Hu G
Citation(s) 36474659
Submission date Jul 08, 2022
Last update date Mar 01, 2023
Contact name Gangqing Hu
E-mail(s) michael.hu@hsc.wvu.edu
Organization name West Virginia University
Department MicroBiology, Immunology, and Cell Biology
Lab 2072A, HSC North, Floor 2
Street address 64 Medical Center Drive
City Morgantown
State/province West Virginia
ZIP/Postal code 26506-9177
Country USA
 
Platforms (1)
GPL21255 Illumina HiSeq 2500 (Oryctolagus cuniculus)
Samples (10)
GSM6319594 RNA-Seq Cells PL MP01
GSM6319595 RNA-Seq Cells ASC MP02
GSM6319596 RNA-Seq Cells DF MP03
Relations
BioProject PRJNA857092

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE207804_RNAseq_all_rpkm.txt.gz 1.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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