NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE20897 Query DataSets for GSE20897
Status Public on Oct 18, 2010
Title Effect of hit compounds on ethylene mutant eto1-4
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Analysis of ethylene mutant (eto1-4) genome expression profile altered by ethylene antagonists. Results uncovered a significant number of genes that were co-regulated by the ethylene antagonists which may contribution on phenotype difference between WT and eto1-4.
 
Overall design WT (Col-0) or ethylene mutant (eto1-4) were etiolated growth 3-day on 0.5x MS medium as control. Ethylene mutant (eto1-4) etiolated growth 3-day on 0.5x MS medium containing 10 μM different ethylene antagoinsts were used as experimental set. Whole seedling was used for total RNA extraction and cDNA synthesis. cDNA labeling, array hybridization, and scanning followed by standard Affymetrix expression array protocol. Two independent sets of microarray analyses were performed in this assay.
 
Contributor(s) Lin L, Wang L
Citation(s) 20682786
Submission date Mar 16, 2010
Last update date Aug 15, 2018
Contact name Kevin Long-Chi WANG
E-mail(s) lwang@gate.sinica.edu.tw
Phone +886227871181
Fax +886227827954
Organization name Academia Sinica
Department Institute of Plant and Microbial Biology
Street address 128 Section 2, Academia Road
City Taipei
ZIP/Postal code 11529
Country Taiwan
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM522409 Col-0_3-day-old_rep1
GSM522410 eto1-4_3-day-old_rep1
GSM522411 eto1-4 + 9393_3-day-old_rep1
Relations
Affiliated with GSE69995
BioProject PRJNA124393

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20897_RAW.tar 28.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap