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GEO accession:
Series GSE210236
Query DataSets for GSE210236
Status
Public on Nov 09, 2022
Title
PR-DUB preserves Polycomb repression by preventing excessive accumulation of H2Aub1, an antagonist of nucleosome stacking
Organism
Drosophila melanogaster
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36357125
Submission date
Aug 01, 2022
Last update date
Jul 26, 2023
Contact name
Jürg Müller
Organization name
Max Planck Institute of Biochemistry
Street address
Am Klopferspitz
City
Martinsried
State/province
Bavaria
ZIP/Postal code
82152
Country
Germany
Platforms (1)
GPL19132
Illumina NextSeq 500 (Drosophila melanogaster)
Samples (119)
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More...
GSM6424230
calyC131S_13-17hr_rep1
GSM6424231
wt_13-17hr_rep1
GSM6424232
wt_13-17hr_rep2
GSM6424233
H2Aub1_Asx0_21-24hr_rep1_#8
GSM6424234
H2Aub1_Asx0_21-24hr_rep2_#10
GSM6424235
H2Aub1_calyC131S_0-6hr_rep1_#6
GSM6424236
H2Aub1_calyC131S_0-6hr_rep2_#7
GSM6424237
H2Aub1_calyC131S_13-17hr_rep1_#6
GSM6424238
H2Aub1_calyC131S_13-17hr_rep2_#7
GSM6424239
H2Aub1_calyC131S_21-24hr_rep1_#6
GSM6424240
H2Aub1_calyC131S_21-24hr_rep2_#7
GSM6424241
H2Aub1_SceI48A_0-6hr_rep1_#6
GSM6424242
H2Aub1_SceI48A_0-6hr_rep2_#7
GSM6424243
H2Aub1_SceI48A_13-17hr_rep1_#6
GSM6424244
H2Aub1_SceI48A_13-17hr_rep2_#7
GSM6424245
H2Aub1_SceI48A_21-24hr_rep1_#6
GSM6424246
H2Aub1_SceI48A_21-24hr_rep2_#7
GSM6424247
H2Aub1_wt_HaltereLeg_Larva_rep1_#13
GSM6424248
H2Aub1_wt_HaltereLeg_Larva_rep2_#14
GSM6424251
H2Aub1_wt_21-24hr_rep1_#1
GSM6424252
H2Aub1_wt_21-24hr_rep2_#8
GSM6424253
H2Aub1_wt_21-24hr_rep3_#10
GSM6424254
H2Aub1_wt_0-6hr_rep1_#6
GSM6424255
H2Aub1_wt_0-6hr_rep2_#7
GSM6424256
H2Aub1_wt_13-17hr_rep1_#6
GSM6424257
H2Aub1_wt_13-17hr_rep2_#7
GSM6424258
H2Aub1_wt_21-24hr_rep4_#6
GSM6424259
H2Aub1_wt_21-24hr_rep5_#7
GSM6424262
H2Aub1_wt_Wing_Larva_rep1_#13
GSM6424263
H2Aub1_wt_Wing_Larva_rep2_#14
GSM6424264
input_Asx0_21-24hr__#5
GSM6424265
input_Asx0_21-24hr__#8
GSM6424266
input_Asx0_21-24hr__#9
GSM6424267
input_Asx0_21-24hr__#10
GSM6424268
input_Asx0_21-24hr__#11
GSM6424269
input_calyC131S_0-6hr__#6
GSM6424270
input_calyC131S_0-6hr__#7
GSM6424271
input_calyC131S_13-17hr__#6
GSM6424272
input_calyC131S_13-17hr__#7
GSM6424273
input_calyC131S_21-24hr__#6
GSM6424274
input_calyC131S_21-24hr__#7
GSM6424275
input_SceI48A_21-24hr__#8
GSM6424276
input_SceI48A_0-6hr__#6
GSM6424277
input_SceI48A_0-6hr__#7
GSM6424278
input_SceI48A_13-17hr__#6
GSM6424279
input_SceI48A_13-17hr__#7
GSM6424280
input_SceI48A_21-24hr__#6
GSM6424281
input_SceI48A_21-24hr__#7
GSM6424282
input_wt_HaltereLeg_Larva__#13
GSM6424283
input_wt_HaltereLeg_Larva__#14
GSM6424286
input_wt_21-24hr__#1
GSM6424287
input_wt_21-24hr__#2
GSM6424288
input_wt_21-24hr__#5
GSM6424289
input_wt_21-24hr__#8
GSM6424290
input_wt_21-24hr__#10
GSM6424291
input_wt_21-24hr__#11
GSM6424292
input_wt_21-24hr__#12
GSM6424293
input_wt_0-6hr__#6
GSM6424294
input_wt_0-6hr__#7
GSM6424295
input_wt_13-17hr__#6
GSM6424296
input_wt_13-17hr__#7
GSM6424297
input_wt_21-24hr__#6
GSM6424298
input_wt_21-24hr__#7
GSM6424301
input_wt_Wing_Larva__#13
GSM6424302
input_wt_Wing_Larva__#14
GSM6424303
H3K27me3_Asx0_21-24hr_rep1_#8
GSM6424304
H3K27me3_Asx0_21-24hr_rep2_#9
GSM6424305
H3K27me3_SceI48A_21-24hr_rep1_#8
GSM6424306
H3K27me3_wt_HaltereLeg_Larva_rep1_#13
GSM6424307
H3K27me3_wt_HaltereLeg_Larva_rep2_#14
GSM6424308
H3K27me3_wt_21-24hr_rep1_#8
GSM6424309
H3K27me3_wt_Wing_Larva_rep1_#13
GSM6424310
H3K27me3_wt_Wing_Larva_rep2_#14
GSM6424311
H3K27me2_wt_21-24hr_rep1_#12
GSM6424312
H3K27me3_calyC131S_0-6hr_rep1_#6
GSM6424313
H3K27me3_calyC131S_0-6hr_rep2_#7
GSM6424314
H3K27me3_calyC131S_13-17hr_rep1_#6
GSM6424315
H3K27me3_calyC131S_13-17hr_rep2_#7
GSM6424316
H3K27me3_calyC131S_21-24hr_rep1_#6
GSM6424317
H3K27me3_calyC131S_21-24hr_rep2_#7
GSM6424318
H3K27me3_SceI48A_0-6hr_rep1_#6
GSM6424319
H3K27me3_SceI48A_0-6hr_rep2_#7
GSM6424320
H3K27me3_SceI48A_13-17hr_rep1_#6
GSM6424321
H3K27me3_SceI48A_13-17hr_rep2_#7
GSM6424322
H3K27me3_SceI48A_21-24hr_rep2_#6
GSM6424325
H3K27me3_wt_21-24hr_rep2_#1
GSM6424326
H3K27me3_wt_0-6hr_rep1_#6
GSM6424327
H3K27me3_wt_0-6hr_rep2_#7
GSM6424328
H3K27me3_wt_13-17hr_rep1_#6
GSM6424329
H3K27me3_wt_13-17hr_rep2_#7
GSM6424330
H3K27me3_wt_21-24hr_rep3_#6
GSM6424334
H3K36me2_wt_21-24hr_rep1_#2
GSM6424335
Pc_Asx0_21-24hr_rep1_#5
GSM6424336
Pc_wt_21-24hr_rep1_#5
GSM6424337
Pho_calyC131S_13-17hr_rep1_#7
GSM6424338
Pho_wt_21-24hr_rep1_#8
GSM6424339
Pho_wt_0-6hr_rep1_#6
GSM6424340
Pho_wt_13-17hr_rep1_#6
GSM6424341
Pho_wt_21-24hr_rep2_#6
GSM6424342
PolIIS5P_Asx0_21-24hr_rep1_#11
GSM6424343
PolIIS5P_wt_21-24hr_rep1_#11
GSM6424344
Scm_calyC131S_13-17hr_rep1_#7
GSM6424345
Scm_wt_13-17hr_rep1_#7
GSM6424346
Asx0_rep1
GSM6424347
Asx0_rep2
GSM6424348
Asx0_rep3
GSM6424349
Asx0_rep4
GSM6424350
Asx0_rep5
GSM6424351
SceI48A_rep1
GSM6424352
SceI48A_rep2
GSM6424353
SceI48A_rep3
GSM6424354
SceI48A_rep4
GSM6424355
wt_for_comparison_with_Asx0_rep1
GSM6424356
wt_for_comparison_with_Asx0_rep2
GSM6424357
wt_for_comparison_with_Asx0_rep3
GSM6424358
wt_for_comparison_with_SceI48A_rep1
GSM6424359
wt_for_comparison_with_SceI48A_rep2
GSM6424360
wt_for_comparison_with_SceI48A_rep3
GSM6424361
wt_for_comparison_with_SceI48A_rep4
This SuperSeries is composed of the following SubSeries:
GSE210232
PR-DUB preserves Polycomb repression by preventing excessive accumulation of H2Aub1, an antagonist of nucleosome stacking (ATAC-Seq)
GSE210233
PR-DUB preserves Polycomb repression by preventing excessive accumulation of H2Aub1, an antagonist of nucleosome stacking (ChIP-Seq)
GSE210235
PR-DUB preserves Polycomb repression by preventing excessive accumulation of H2Aub1, an antagonist of nucleosome stacking (RNA-Seq)
Relations
BioProject
PRJNA864800
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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TXT
Supplementary file
Size
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File type/resource
GSE210236_RAW.tar
10.6 Gb
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TAR (of BW)
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