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Series GSE211340 Query DataSets for GSE211340
Status Public on Jul 04, 2024
Title Microglia aging advances through intermediate states that drive inflammatory activation and cognitive decline
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary TGFB-signaling is important for the establishment of microglia homeostasis; however, it's role in aging has remained vague. We found that Tgfb1 and TGFB signaling is altered during hippocampal microglia aging. To investigate the effects that microglia-derived Tgfb1 has on microglia aging, we performed scRNA-Seq on Cd11b+ cells from the hippocampus of mature mice where Tgfb1 had been ablated from Cx3cr1 cells post-maturity.
 
Overall design scRNA-Seq of Cx3cr1-CreERT Tgfb1 cKO Cd11b+ cells from mature mouse hippocampi
 
Contributor(s) Shea J, Villeda S
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Submission date Aug 16, 2022
Last update date Jul 04, 2024
Contact name Jeremy Michael Shea
Organization name University of California, San Francisco
Department Anatomy
Lab Villeda
Street address 513 Parnassus Avenue
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM6466285 Tgfb1_KO_1
GSM6466286 Tgfb1_KO_2
GSM6466287 Tgfb1_Het_1
Relations
BioProject PRJNA869921

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211340_RAW.tar 596.3 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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