|
| Status |
Public on Oct 26, 2022 |
| Title |
Epigenome analysis of neuroblastoma cell treated by NEN under normoxia and hypoxia |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
|
| Summary |
Genome wide DNA methylation profiling of neuroblastoma cell SK-N-BE(2) treated by 1µM NEN under normoxia and hypoxia for 24hrs. The IInfinium Human MethylationEPIC BeadChip v1.0 B5 was used to obtain DNA methylation profiles across approximately 850,000 methylation sites in the genome of neuroblastoma. Samples included 4 group with 3 biological replicates: (1) normoxia_CTRL (2) normoxia_NEN (3) hypoxia_CTRL (4) hypoxia_NEN
|
| |
|
| Overall design |
Bisulphite converted DNA from the 12 samples were hybridised to the Illumina Infinium epic Human Methylation Beadchip v1.0 B5
|
| Web link |
https://doi.org/10.1158/0008-5472.CAN-22-1029
|
| |
|
| Contributor(s) |
Ye J, Jiang H |
| Citation(s) |
36318118 |
| |
| Submission date |
Aug 18, 2022 |
| Last update date |
Jan 26, 2023 |
| Contact name |
Jiangbin ye |
| E-mail(s) |
yej1@stanford.edu
|
| Phone |
650-724-7459
|
| Organization name |
Stanford university
|
| Street address |
269 Campus Drive CCSR-South 1245
|
| City |
palo alto |
| State/province |
California |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA870899 |
Less...
More...