|
| Status |
Public on Dec 15, 2022 |
| Title |
Enhancers display sequence flexibility constrained by transcription factor motif syntax |
| Organisms |
Drosophila melanogaster; Homo sapiens |
| Experiment type |
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 19, 2022 |
| Last update date |
Dec 15, 2022 |
| Contact name |
Bernardo P de Almeida |
| E-mail(s) |
bernardo.almeida@imp.ac.at
|
| Organization name |
Research Institute of Molecular Pathology (IMP)
|
| Lab |
Stark Lab
|
| Street address |
Campus-Vienna-Biocenter 1
|
| City |
Wien |
| ZIP/Postal code |
1030 |
| Country |
Austria |
| |
|
| Platforms (3) |
| GPL21697 |
NextSeq 550 (Homo sapiens) |
| GPL22106 |
NextSeq 550 (Drosophila melanogaster) |
| GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
|
| Samples (20)
|
| GSM6482111 |
LibFR013_Twistmix2_STARRseq_dev_rep1 |
| GSM6482112 |
LibFR013_Twistmix2_STARRseq_dev_rep2 |
| GSM6482113 |
LibFR013_Twistmix2_STARRseq_dev_rep3 |
| GSM6482114 |
ced-6 enhancer libraries rep1 input |
| GSM6482115 |
ced-6 enhancer libraries rep2 input |
| GSM6482116 |
ced-6 enhancer libraries rep1 STARR-seq |
| GSM6482117 |
ced-6 enhancer libraries rep2 STARR-seq |
| GSM6482118 |
ZnT63C enhancer libraries rep1 input |
| GSM6482119 |
ZnT63C enhancer libraries rep2 input |
| GSM6482120 |
ZnT63Cenhancer libraries rep1 STARR-seq |
| GSM6482121 |
ZnT63C enhancer libraries rep2 STARR-seq |
| GSM6482142 |
LibFR012_LibFR015_humantwistmix_input_rep1 |
| GSM6482143 |
LibFR012_LibFR015_humantwistmix_input_rep2 |
| GSM6482144 |
LibFR012_LibFR015_humantwistmix_input_rep3 |
| GSM6482145 |
LibFR012_LibFR015_humantwistmix_STARRseq_rep1 |
| GSM6482146 |
LibFR012_LibFR015_humantwistmix_STARRseq_rep2 |
| GSM6482147 |
LibFR012_LibFR015_humantwistmix_STARRseq_rep3 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE211654 |
Enhancers display sequence flexibility constrained by transcription factor motif syntax [Drosophila motif pasting STARR-seq] |
| GSE211655 |
Enhancers display sequence flexibility constrained by transcription factor motif syntax [Drosophila random variant STARR-seq] |
| GSE211657 |
Enhancers display sequence flexibility constrained by transcription factor motif syntax [Human motif pasting STARR-seq] |
|
| Relations |
| BioProject |
PRJNA871261 |
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