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Series GSE211704 Query DataSets for GSE211704
Status Public on Sep 06, 2022
Title Integrated analysis of cancer-related pathways affected by genetic and epigenetic alterations in gastric cancer
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary DNA methylation was analyzed in human gastric cancers, and methylation status of cancer-related genes was analyzed.
 
Overall design DNA methylation was analyzed in human gastric cancers, and methylation status of cancer-related genes was analyzed.
Genome-wide DNA methylation analysis was conducted by an Infinium HumanMethylation450 BeadChip array.
 
Contributor(s) Takeshima H, Yoda Y, Yamashita S, Ushijima T
Citation(s) 24510342
Submission date Aug 21, 2022
Last update date Nov 14, 2022
Contact name Hideyuki Takeshima
E-mail(s) takeshima.hideyuki@hoshi.ac.jp
Organization name Hoshi University
Department Institute for Advanced Life Sciences
Lab Department of Epigenomics
Street address 2-4-41 Ebara
City Shinagawa-ku
State/province Tokyo
ZIP/Postal code 142-8501
Country Japan
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (50)
GSM6499512 human gastric cancer (S1TP)
GSM6499513 human gastric cancer (S2TP)
GSM6499514 human gastric cancer (S3TP)
Relations
BioProject PRJNA871877

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211704_RAW.tar 583.5 Mb (http)(custom) TAR (of IDAT)
GSE211704_sample26_to_sample40_unmethylated_methylated.txt.gz 62.8 Mb (ftp)(http) TXT
GSE211704_sample41-50_unmethylated_methylated_signal.txt.gz 42.5 Mb (ftp)(http) TXT
GSE211704_signals.txt.gz 103.5 Mb (ftp)(http) TXT
Processed data included within Sample table
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