|
| Status |
Public on Jun 21, 2024 |
| Title |
Systematic Study on the Three-Dimensional Genome of Escherichia Coli and Its Thermal Adaptation Mechanism (RNA-Seq) |
| Organism |
Escherichia coli str. K-12 substr. MG1655 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Total RNA was extracted and sequenced from Escherichia coli cultured to log phase and stable phase at 37 ° C and 45 ° C, respectively. The transcriptome data of Escherichia coli under four different growth conditions were obtained.
|
| |
|
| Overall design |
The transcripome data of Escherichia coli cultured at 45℃ and 37℃ to log phase and stable phase were extracted and cross-compared
|
| |
|
| Contributor(s) |
Wang X, Ma B |
| Citation(s) |
38930611 |
| |
| Submission date |
Aug 22, 2022 |
| Last update date |
Jul 31, 2024 |
| Contact name |
Xuting Wang |
| E-mail(s) |
wxtmonica@webmail.hzau.edu.cn
|
| Phone |
18827449994
|
| Organization name |
HuaZhong Agriculture University
|
| Street address |
hongshan
|
| City |
wuhan |
| State/province |
hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL24659 |
Illumina HiSeq 4000 (Escherichia coli str. K-12 substr. MG1655) |
|
| Samples (12)
|
| GSM6503014 |
RNA-seq of E. coli wt cells in early logarithmic phase 37°C -Replicate 1 |
| GSM6503015 |
RNA-seq of E. coli wt cells in early logarithmic phase 37°C -Replicate 2 |
| GSM6503016 |
RNA-seq of E. coli wt cells in early logarithmic phase 37°C -Replicate 3 |
| GSM6503017 |
RNA-seq of E. coli wt cells in stationary phase 37°C -Replicate 1 |
| GSM6503018 |
RNA-seq of E. coli wt cells in stationary phase 37°C -Replicate 2 |
| GSM6503019 |
RNA-seq of E. coli wt cells in stationary phase 37°C -Replicate 3 |
| GSM6503020 |
RNA-seq of E. coli wt cells in early logarithmic phase 45°C -Replicate 1 |
| GSM6503021 |
RNA-seq of E. coli wt cells in early logarithmic phase 45°C -Replicate 2 |
| GSM6503022 |
RNA-seq of E. coli wt cells in early logarithmic phase 45°C -Replicate 3 |
| GSM6503023 |
RNA-seq of E. coli wt cells in stationary phase 45°C -Replicate 1 |
| GSM6503024 |
RNA-seq of E. coli wt cells in stationary phase 45°C -Replicate 2 |
| GSM6503025 |
RNA-seq of E. coli wt cells in stationary phase 45°C -Replicate 3 |
|
| This SubSeries is part of SuperSeries: |
| GSE211825 |
Spatial Chromosome Organization and Adaptation of Escherichia coli under Heat Stress |
|
| Relations |
| BioProject |
PRJNA872175 |
Less...
More...