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Series GSE212031 Query DataSets for GSE212031
Status Public on Aug 01, 2024
Title Next Generation translatome Sequencing (Ribo-seq) of Papillary Thyroid Carcinoma tissue sample and adjacent normal tissue
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Through the translatome sequencing (Ribo-seq) of clinically obtained papillary thyroid carcinoma and its paired adjacent tissues, we tried to find the differences in the translation of various genes and evaluate the translation function of circular RNAs in the two tissues.
We then performed gene expression profiling analysis using data obtained from Ribo-seq of 4 different pairs of Papillary Thyroid Carcinoma tissue sample and adjacent normal tissue. At the translatome level, we screened out 247 circRNAs with translation ability.
 
Overall design Comparative gene expression profiling analysis of Ribo-seq data in 4 pairs of Papillary Thyroid Carcinoma tissue sample and adjacent normal tissue.
 
Contributor(s) Lv C, Zhang H
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Submission date Aug 25, 2022
Last update date Aug 01, 2024
Contact name lv chengzhou
E-mail(s) yidalcz@126.com
Phone 13390159116
Organization name the first hospital of china medical university
Department thyroid surgery
Street address nanjingbeijie 155
City shenyang
State/province liaoing
ZIP/Postal code 110001
Country China
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (8)
GSM6507553 T1 (Ribo-seq)
GSM6507554 T2 (Ribo-seq)
GSM6507555 T3 (Ribo-seq)
Relations
BioProject PRJNA873584

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212031_all.genes.expression.annot.txt.gz 4.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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