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Series GSE212145 Query DataSets for GSE212145
Status Public on Oct 19, 2022
Title Transcriptional Profiling of Enterococcus faecalis During Surface Penetration
Organism Enterococcus faecalis OG1RF
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the transcriptional changes that Enterococcus faecalis undergoes during agar surface-penetration, which promote cell envelope remodeling and tolerance to stress.
 
Overall design Comparative gene expression analysis of RNA-seq data for agar-penetrating versus non-penetrating E. faecalis cells.
 
Contributor(s) Ramos Y, Morales DK
Citation(s) 36354750
Submission date Aug 26, 2022
Last update date Jan 11, 2023
Contact name Diana K. Morales
E-mail(s) dim2018@med.cornell.edu
Phone 2127460451
Organization name Weill Cornell Medicine
Department Obstetrics and Gynecology
Street address 1300 York Ave
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL32603 Illumina HiSeq 4000 (Enterococcus faecalis OG1RF)
Samples (18)
GSM6510161 Enterococci recovered from colonies grown 24h on MOLP_1
GSM6510162 Enterococci recovered from colonies grown 24h on MOLP_2
GSM6510163 Enterococci recovered from colonies grown 24h on MOLP_3
Relations
BioProject PRJNA874092

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212145_FPKM_expression_In_and_Out.xlsx 569.4 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record
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