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Series GSE212478 Query DataSets for GSE212478
Status Public on Sep 06, 2022
Title Comparison of miRNA transcriptomes reveals differential regulation from ten tissues and four development stages of Sika Deer
Organism Cervus nippon
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To elucidate the complex physiological process of the growth, development and immunity response of Sika Deer, this study evaluated the changes of miRNA profiles in the four developmental stages (juvenile, adolescence, adult and aged) of ten tissue (adrenal, antler, brain, heart, kidney, lung, liver, skeletal muscle, spleen and testes). The results showed that a total of 306 known miRNAs and 143 novel miRNAs were obtained. Many miRNAs displayed organ-specificity and age-specificity. The largest number of miRNAs were enriched in the brain, some of which were shared only between the brain and adrenal. These miRNAs were involved in maintaining specific functions within the brain and adrenal. Additionally, the adolescence-adult transition of Sika Deer was a crucial stage in its life cycle. In conclusion, our study provided abundant data support for the current research Sika Deer. It also contributes to understand the role of miRNAs play in regulating the growth, development and immunity response of Sika Deer.
 
Overall design The miRNA expression profiles in the four developmental stages of ten tissue in Sika Deer were generated by Illumina HiSeq2500 sequencing
 
Contributor(s) Jia B, Du R, Yang F
Citation(s) 36452144
Submission date Aug 31, 2022
Last update date Dec 16, 2022
Contact name Boyin Jia
Organization name Jilin Agricultural University
Department College of Animal Science and Technology
Street address 2888 Xincheng Street
City Changchun
State/province Jilin
ZIP/Postal code 130118
Country China
 
Platforms (1)
GPL27967 Illumina HiSeq 2500 (Cervus nippon)
Samples (40)
GSM6533554 Adr-1
GSM6533555 Adr-2
GSM6533556 Adr-3
Relations
BioProject PRJNA875481

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212478_RAW.tar 90.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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