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Series GSE212493 Query DataSets for GSE212493
Status Public on Sep 04, 2022
Title Effect of aging and dFOXO knockout on small RNAs
Organism Drosophila melanogaster
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To examine the effect of loss of dFOXO on the small RNA landscape of aging animals, we sequenced total small RNA collected from whole wildtype (wDah) and dFOXO-null (dfoxoΔ94) flies at young (5-6 days) and old (31 days) age.
 
Overall design Two biological replicates of total small RNA from whole control (wDah) and dFOXO-null flies at were collected at young and old ages
 
Contributor(s) Gartland S, Marr MT
Citation(s) 36383505
Submission date Sep 01, 2022
Last update date Dec 01, 2022
Contact name Siobhan Gartland
Organization name Brandeis University
Department Biology
Lab Marr
Street address 415 SOUTH STREET
City Waltham
State/province MA
ZIP/Postal code 02453
Country USA
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (16)
GSM6533718 wDah_female_totalsmall_05d_rep1
GSM6533719 wDah_male_totalsmall_05d_rep1
GSM6533720 dFOXO-null_female_totalsmall_05d_rep1
This SubSeries is part of SuperSeries:
GSE212494 The small RNA landscape across age and loss of dFOXO in Drosophila
Relations
BioProject PRJNA875630

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212493_totalsmallRNA_mappedtodm6_normalized.txt.gz 91.7 Kb (ftp)(http) TXT
GSE212493_totalsmallRNA_mappedtodm6_prenormalization.txt.gz 41.8 Kb (ftp)(http) TXT
GSE212493_totalsmallRNA_mappedtomiRNAstransposons_21nt_normalized.txt.gz 19.4 Kb (ftp)(http) TXT
GSE212493_totalsmallRNA_mappedtomiRNAstransposons_21nt_prenormalization.txt.gz 8.1 Kb (ftp)(http) TXT
GSE212493_totalsmallRNA_mappedtomiRNAstransposons_normalized.txt.gz 25.1 Kb (ftp)(http) TXT
GSE212493_totalsmallRNA_mappedtomiRNAstransposons_prenormalization.txt.gz 11.5 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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