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| Status |
Public on Sep 03, 2023 |
| Title |
Tryptophan as a miR team organizer prevents colon cancer liver metastasis [colon] |
| Platform organism |
synthetic construct |
| Sample organism |
Mus musculus |
| Experiment type |
Non-coding RNA profiling by array
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| Summary |
Tryptophan treatment play a significant role in miR expression. We have characterized the miR expression network through miR-on-chip profiling of the mouse treated with or without tryptophan.
In this dataset, we include the expression data from mouse small intestine and colon tissue treated with or without tryptophan.
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| Overall design |
C57BL/6 mice are randomly devided into two groups. Each group of mice (n=8) were respectively fed with Trp depleted diet (TrpD, 0% tryptophan, w/w) or a paired diet (PD, 1.2% tryptophan, w/w). Mice tissue were dissected and pooled as two samples for each treatment.
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| Contributor(s) |
Fangyi X, Sabine W |
| Citation missing |
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| Submission date |
Sep 02, 2022 |
| Last update date |
Sep 03, 2023 |
| Contact name |
Fangyi Xu |
| E-mail(s) |
xufangyi4527@gmail.com
|
| Phone |
3462400801
|
| Organization name |
University of Louisville
|
| Department |
BCC cancer center
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| Lab |
Zhang
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| Street address |
505 S Hancock street
|
| City |
Louisville |
| State/province |
Kentucky |
| ZIP/Postal code |
40202 |
| Country |
USA |
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| Platforms (1) |
| GPL21572 |
[miRNA-4] Affymetrix Multispecies miRNA-4 Array [ProbeSet ID version] |
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| Samples (4)
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| GSM6542046 |
Colon tissue from mice treated with TrpD 1 |
| GSM6542047 |
Colon tissue from mice treated with TrpD 2 |
| GSM6542048 |
Colon tissue from mice treated with PD 1 |
| GSM6542049 |
Colon tissue from mice treated with PD 2 |
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| Relations |
| BioProject |
PRJNA876285 |
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