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| Status |
Public on May 21, 2023 |
| Title |
Effect of temperature on global transcriptomic profile in the halotolerant cyanobacterium Halothece sp. PCC 7418 |
| Organism |
Halothece sp. PCC 7418 |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Halotolerant species are of interest since they occur naturally in environments with excess toxic ions. The cyanobacterium Halothece sp. PCC 7418 (hereafter referred to as Halothece) exhibits remarkable halotolerance and was used to examine stress-responsive regulatory mechanisms. The effects of temperature on Halothece transcriptomes were examined using RNA sequencing.
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| Overall design |
Halothece sp. PCC7418 cells were exposed to 24 h heat or cold shock. Then, total RNA was extracted and analyzed by RNA-seq analysis.
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| Contributor(s) |
Kageyama H, Waditee-Sirisattha R |
| Citation missing |
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| Submission date |
Sep 12, 2022 |
| Last update date |
May 21, 2023 |
| Contact name |
Hakuto Kageyama |
| E-mail(s) |
kageyama@meijo-u.ac.jp
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| Organization name |
Meijo University
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| Street address |
1-501, Shiogamaguchi, Tempaku-ku
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| City |
Nagoya |
| State/province |
Aichi |
| ZIP/Postal code |
4688502 |
| Country |
Japan |
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| Platforms (1) |
| GPL32361 |
Illumina NovaSeq 6000 (Halothece sp. PCC 7418) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA879450 |
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