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Series GSE213632 Query DataSets for GSE213632
Status Public on Feb 05, 2024
Title Transcriptomic signature of white adipose tissue from wild type and Acod1-deficient mice in response to high fat diet
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Aconitate decarboxylase 1 (ACOD1) is the enzyme synthesizing itaconate, an immuno-regulatory metabolite tuning host-pathogen interactions. Such functions are achieved by affecting metabolic pathways regulating inflammation and microbe survival. However, at the whole-body level, metabolic roles of itaconate remain largely unresolved. By using multiomics-integrated approaches, here we show that ACOD1 responds to high-fat diet consumption in mice by promoting gut microbiota alterations supporting metabolic disease. Genetic disruption of itaconate biosynthesis protects mice against obesity, alterations in glucose homeostasis and liver metabolic dysfunctions by decreasing meta-inflammatory responses to dietary lipid overload. Mechanistically, fecal metagenomics and microbiota transplantation experiments demonstrate such effects are dependent on an amelioration of the intestinal ecosystem composition, skewed by high-fat diet feeding towards obesogenic phenotype. In particular, unbiased fecal microbiota profiling and axenic culture experiments point towards a primary role for itaconate in inhibiting growth of Bacteroidaceae and Bacteroides, family and genus of Bacteroidetes phylum, the major gut microbial taxon associated with metabolic health. Specularly to the effects imposed by Acod1 deficiency on fecal microbiota, oral itaconate consumption enhances diet-induced gut dysbiosis and associated obesogenic responses in mice. Unveiling an unrecognized role of itaconate, either endogenously produced or exogenously administered, in supporting microbiota alterations underlying diet-induced obesity in mice, our study points ACOD1 as a target against inflammatory consequences of overnutrition.
 
Overall design Gene expression profiling was performed using data obtained from RNA-seq derived from inguinal (iWAT) and epididymal (eWAT) white adipose tissues from wild type mice receiving normal chow diet and high fat diet (HFD) (60% kalories from fat) and Acod1-/- mice receiving HFD.
 
Contributor(s) Simone C, Tanja E
Citation(s) 38302438
Submission date Sep 19, 2022
Last update date Feb 05, 2024
Contact name Tanja Eberhart
Organization name IRCCS San Raffaele Scientific Institute
Street address Via Olgettina
City Milan
ZIP/Postal code 20132
Country Italy
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (25)
GSM6590547 eWAT-WT-ND-1
GSM6590548 eWAT-WT-ND-2
GSM6590549 eWAT-WT-ND-3
Relations
BioProject PRJNA882000

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE213632_RAW.tar 11.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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