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Series GSE214184 Query DataSets for GSE214184
Status Public on Sep 29, 2022
Title Effect of disruption of tonB, exbB, exbD and MccY treatment on gene expression in Salmonella enterica subsp. enterica serovar Typhimurium
Organism Salmonella enterica subsp. enterica serovar Typhimurium
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the effects of MccY on Salmonella Typhimurium, Ton system genes mutants were constructed and RNA-seq analysis were performed.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for tonB, exbB, exbD mutants and MccY treatment group.
 
Contributor(s) Han Y, Cao W, Feng S
Citation(s) 36453909
Submission date Sep 26, 2022
Last update date Dec 30, 2022
Contact name Saixiang Feng
E-mail(s) fengsx@scau.edu.cn
Phone +18620564905
Organization name South China Agricultural University
Street address South China Agricultural University, No. 483, Wushan Road, Tianhe District
City Guangzhou
State/province Guangdong
ZIP/Postal code 510642
Country China
 
Platforms (1)
GPL30218 Illumina NovaSeq 6000 (Salmonella enterica subsp. enterica serovar Typhimurium)
Samples (12)
GSM6600746 WT rep1
GSM6600747 WT rep2
GSM6600748 WT rep3
Relations
BioProject PRJNA884328

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214184_WT53_vs_exbB53.DESeq.xlsx 989.2 Kb (ftp)(http) XLSX
GSE214184_WT53_vs_exbD53.DESeq.xlsx 991.9 Kb (ftp)(http) XLSX
GSE214184_WT53_vs_tonB53.DESeq.xlsx 963.5 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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