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Series GSE214477 Query DataSets for GSE214477
Status Public on Oct 04, 2022
Title Gene expression-based, individualized outcome prediction for SAbR treated patients with primary RCC
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptomic GSEA of the pre- and at 1-year post-radiation tumor cells shows changes in the apoptosis and cell senescence pathways
 
Overall design In the study presented here, 3 patients out of a cohort of 16 RCC cases, followed up for 1-year post-RT, was used to acquire expression profiles of a total of ~ 19 K unique genes
 
Contributor(s) Raquibul H, James Z
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 29, 2022
Last update date Oct 06, 2022
Contact name Raquibul Hannan
E-mail(s) raquibul.hannan@utsouthwestern.edu
Phone 214-648-4003
Organization name UT Southwestern Medical Center
Street address 2280 Inwood Road
City Dallas
State/province Texas
ZIP/Postal code 75390-9303
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (31)
GSM6607106 Patient 104 post-1 year 1
GSM6607107 Patient 104 baseline 2
GSM6607108 Patient 104 post-1 year 3
Relations
BioProject PRJNA885493

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214477_Hs_R_NGS_WTA_v1.0.pkc.gz 1.9 Mb (ftp)(http) PKC
GSE214477_RAW.tar 1.8 Mb (http)(custom) TAR (of DCC)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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