 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Oct 08, 2022 |
| Title |
Effect of time-course forskolin (FSK) treatment versus rosiglitazone (Rosi) treatment on gene expression in a new immortalized mouse adipocyte progenitor (MAP) cell line (RNA-Seq). |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To characterize biphasic adipocyte browning induced by chronic FSK treatment and compare this process to Rosi-induced browning,
We performed gene expression profiling using MAP cells treated with vehicle or with FSK for mulitple time durations (4h, 1D, and 3D) or with Rosi for 3D.
|
| |
|
| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for MAP cells treated with vehicle, FSK 4h, FSK 1D, FSK 3D, and Rosi 3D (3 replicates per group).
|
| |
|
| Contributor(s) |
Roh HC, Taleb S, So J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Oct 01, 2022 |
| Last update date |
Oct 08, 2022 |
| Contact name |
Jisun So |
| Organization name |
Indiana University School of Medicine
|
| Department |
Biochemistry and Molecular Biology
|
| Street address |
632 Barnhill Drive
|
| City |
Indianapolis |
| State/province |
IN |
| ZIP/Postal code |
46202 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (15)
|
| GSM6612484 |
RNA-Seq MAP cells, FSK4h 1 |
| GSM6612485 |
RNA-Seq MAP cells, FSK4h 2 |
| GSM6612486 |
RNA-Seq MAP cells, FSK4h 3 |
| GSM6612487 |
RNA-Seq MAP cells, FSK1D 1 |
| GSM6612488 |
RNA-Seq MAP cells, FSK1D 2 |
| GSM6612489 |
RNA-Seq MAP cells, FSK1D 3 |
| GSM6612490 |
RNA-Seq MAP cells, FSK3D 1 |
| GSM6612491 |
RNA-Seq MAP cells, FSK3D 2 |
| GSM6612492 |
RNA-Seq MAP cells, FSK3D 3 |
| GSM6612493 |
RNA-Seq MAP cells, Rosi3D 1 |
| GSM6612494 |
RNA-Seq MAP cells, Rosi3D 2 |
| GSM6612495 |
RNA-Seq MAP cells, Rosi3D 3 |
|
| This SubSeries is part of SuperSeries: |
| GSE214598 |
Effect of time-course forskolin (FSK) treatment versus rosiglitazone (Rosi) treatment on the chromatin accessibility landscape in a new immortalized mouse adipocyte progenitor (MAP) cell line |
|
| Relations |
| BioProject |
PRJNA886072 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE214596_RNA_master_counts.txt.gz |
611.1 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
|
|
|
|
 |
Less...
More...