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Series GSE214864 Query DataSets for GSE214864
Status Public on Jul 14, 2023
Title Gene expression profiles in the colonic epithelial cells from mice deficient in the function of St6galnac6, B3galt5 and B3gnt7
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the effect of deficiency of glycosyltransferases on the intestinal epithelial cells, we analyzed the gene expression profiles in colonic epithelial cells of mice deficient in the function of St6galnac6, B3galt5 and B3gnt7.
 
Overall design Intestinal epithelial cells from the colon of wild-type, St6galnac6-/-, B3galt5D116A and B3gnt7-/- C57BL/6J mice.
 
Contributor(s) Okumura R, Taniguchi M, Nakatani A, Okuzaki D
Citation(s) 37385587
Submission date Oct 05, 2022
Last update date Jun 06, 2024
Contact name Daisuke Motooka
E-mail(s) dry_team@ngs.gen-info.osaka-u.ac.jp
Organization name NGS core facility, Research Institute for Microbial Diseases, Osaka University
Street address 3-1, Yamadaoka
City Suita
State/province Osaka
ZIP/Postal code 5650871
Country Japan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM6616983 WT_male_colon_epi
GSM6616984 WT_female_colon_epi
GSM6616985 St6galnac6KO_male_colon_epi
Relations
BioProject PRJNA887413

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214864_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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