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Series GSE215011 Query DataSets for GSE215011
Status Public on Dec 06, 2023
Title Next Generation Sequencing Facilitates Quantitative Analysis of tumor samples from HCC patients receiving Nivolumab.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To identify critical tumor-secreting factors that may contribute to immunotherapy efficacy against HCC, we subjected tumor samples from 10 HCC patients to whole-transcriptome sequencing, and categorized the patients into two groups according to clinical response to nivolumab.
We then performed gene expression profiling analysis using data obtained from RNA-seq of Nivolumab reponders and non-reponsers.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for Nivolumab reponders and non-reponsers.
 
Contributor(s) Liu C, Zhou C, Hung M
Citation(s) 38307859
Submission date Oct 07, 2022
Last update date Feb 15, 2024
Contact name Chunxiao Liu
E-mail(s) liuchunxiao_1989@126.com
Phone 5713763441
Organization name MD Anderson Cancer center
Street address 6565 MD Anderson Blvd., Zayed building. Z11.4000A
City HOUSTON
State/province Texas
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (10)
GSM6619959 Responder, A18_440T
GSM6619960 Responder, A19_174T
GSM6619961 Responder, A19_171T
This SubSeries is part of SuperSeries:
GSE215013 Tumor samples from HCC patients receiving Nivolumab; THP-1 cells under different stimulas.
Relations
BioProject PRJNA906102

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE215011_gene_description_human_samples.txt.gz 3.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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