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| Status |
Public on Jan 07, 2011 |
| Title |
Expression analysis of melanoma harvested from GFP versus SETDB1 transgenic zebrafish (Danio rerio) |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of expression differences between melanomas harvested from MiniCoopR-GFP versus MiniCoopR-SETDB1 transgenic zebrafish.
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| |
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| Overall design |
An eight-chip study using total RNA prepared from four distinct melanomas from zebrafish injected with MiniCoopR-GFP (control) transposon and four distinct melanomas from zebrafish injected with MiniCoopR-SETDB1 transposon. Injected animals carried a p53 loss-of-function mutation, a mutation in nacre, and an mitf:BRAF-V600E transgene. Each chip measures the expression level of 32,292 genes.
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| |
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| Contributor(s) |
Ceol CJ, Houvras Y |
| Citation(s) |
21430779 |
| |
| Submission date |
Apr 23, 2010 |
| Last update date |
Mar 23, 2012 |
| Contact name |
Yariv Houvras |
| Organization name |
Childrens Hospital Boston
|
| Street address |
1 Blackfan Circle
|
| City |
Karp 7 |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL10392 |
Nimblegen Danio rerio Zv7 37K array |
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| Samples (8)
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| This SubSeries is part of SuperSeries: |
| GSE26372 |
Expression analysis of melanoma harvested after GFP or SETDB1 expression |
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| Relations |
| BioProject |
PRJNA141703 |
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