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Series GSE215297 Query DataSets for GSE215297
Status Public on Jan 30, 2023
Title Key circRNAs from goat: discovery, integrated regulatory network and their putative roles in the differentiation of intramuscular adipocytes
Organism Capra hircus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary To find the differentially and highly expressed circRNAs between the early and late stages of intramuscular adipocytes differentiation. Explored their expression profiles and further predicted their possible interaction relationships.
To generated the final circRNA-miRNA interaction network that have valuable functions in adipocyte differentiation.
 
Overall design Illumina HiSeq method was used to compare the whole transcriptomes of goat intramuscular adipocytes differentiation.
 
Contributor(s) Lin Y, Du Y
Citation(s) 36707755
Submission date Oct 12, 2022
Last update date Feb 10, 2023
Contact name changsheng he
E-mail(s) hcs0903@126.com
Phone 13890753825
Organization name southwest minzu university
Street address No. 16, South Section, 1st Ring Roa
City Chengdu
ZIP/Postal code 610041
Country China
 
Platforms (1)
GPL15473 Illumina HiSeq 2000 (Capra hircus)
Samples (10)
GSM6631666 IMA1
GSM6631667 IMA2
GSM6631668 IMA3
Relations
BioProject PRJNA889728

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE215297_CircRNA-miRNA_binding_site.pair.txt.gz 56.4 Kb (ftp)(http) TXT
GSE215297_CircRNA_Readcount_TPM.txt.gz 39.5 Kb (ftp)(http) TXT
GSE215297_novel_circRNAs.txt.gz 120.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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