|
| Status |
Public on Apr 29, 2010 |
| Title |
RgfC/A regulated genes in Streptococcus agalactiae strain A909 |
| Platform organism |
Streptococcus agalactiae A909 |
| Sample organism |
Streptococcus agalactiae |
| Experiment type |
Expression profiling by array
|
| Summary |
Genes that showed altered expression between wild type A909 and isogenic rgfC/A mutant were identified. A strain with a deletion in RgfC/A (SAK_1917/SAK_1918) was derived and microarray analysis was performed to identify genes regulated by the RgfC/A two component system.
strain comparison, global regulation, two component system
|
| |
|
| Overall design |
Deletion mutant was compared to the wild type strain A909 for changes in gene expression
|
| |
|
| Contributor(s) |
Rajagopal L, delosReyes M |
| Citation(s) |
25561709 |
| |
| Submission date |
Apr 28, 2010 |
| Last update date |
Apr 06, 2015 |
| Contact name |
Lakshmi Rajagopal |
| E-mail(s) |
lakshmi.rajagopal@seattlechildrens.org
|
| Phone |
206-884-7336
|
| Fax |
206-884-7311
|
| Organization name |
Seattle Children's Hospital Research Institute
|
| Department |
Pediatric Infectious Disease
|
| Lab |
Rajagopal
|
| Street address |
1900 9th Ave
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98101 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL10363 |
NimbleGen-Streptococcus agalactiae-X4 expression design |
|
| Samples (2) |
| GSM538699 |
Strain WT A909 (two biological replicates) |
| GSM538700 |
Strain LR157 (two biological replicates) |
|
| Relations |
| BioProject |
PRJNA126187 |
