|
| Status |
Public on Aug 31, 2010 |
| Title |
New insights on resistance mechanisms to antimicrobial compounds in a plant pathogen biofilm |
| Organism |
Xylella fastidiosa 9a5c |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of whole genome gene expression level changes in Xylella fastidiosa 9a5c biofilm, submitted to treatments with sub inhibitory and inhibitory concentrations of copper and tetracycline.
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| Overall design |
A study of Xylella fastidiosa 9a5c was done using total RNA recovered from biofilm bacterial cells submitted to 3 or 7mM of CuSO4 or 100 or 800 µg/ml of tetracycline. Each chip measures the expression level of 2832 genes from Xylella fastidiosa 9a5c with thirteen 60-mer probe pairs (PM/MM) per gene, with five-fold technical redundancy.
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| Contributor(s) |
Muranaka LS, Takita MA, Olivato JC, Kishi LT, Machado MA, Souza AA |
| Citation(s) |
22730126 |
| |
| Submission date |
May 04, 2010 |
| Last update date |
Sep 06, 2012 |
| Contact name |
Alessandra Alves De Souza |
| E-mail(s) |
alessandra@centrodecitricultura.br
|
| Organization name |
Instituto Agronomico de Campinas
|
| Department |
Centro de Citricultura Sylvio Moreira
|
| Lab |
Citrus Biotechnology lab
|
| Street address |
Rod Anhanguera KM 158
|
| City |
Cordeiropolis |
| State/province |
Sao Paulo |
| ZIP/Postal code |
13490970 |
| Country |
Brazil |
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| Platforms (1) |
| GPL10380 |
NimbleGen_Xylella fastidiosa 9a5c_4x72K array |
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| Samples (15)
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| Relations |
| BioProject |
PRJNA125915 |
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