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Series GSE216973 Query DataSets for GSE216973
Status Public on Aug 29, 2024
Title Gene expression profiling analysis of RNA-seq data derived from mice' visual cortex total RNA.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression profiling analysis of RNA-seq data derived from mice' visual cortex total RNA. Tissues were harvested at specific time points over the day either over a normal 12/12 light/dark cycle, or in a control condition where the mice were also housed in 12/12 conditions but the light did not turn on for the last day, the day of tissue collection.
 
Overall design Gene expression profiling analysis of RNA-seq data derived from mice' visual cortex total RNA. Tissues were harvested at specific time points over the day either over a normal 12/12 light/dark cycle, or in a control condition where the mice were also housed in 12/12 conditions but the light did not turn on for the last day, the day of tissue collection.
Web link https://pubmed.ncbi.nlm.nih.gov/39244753/
 
Contributor(s) Kushinsky D, Tsivourakis E, Apelblat D, Roethler O, Breger-Mikulincer M, Cohen-Kashi Malina K, Spiegel I
Citation(s) 39244753
Submission date Nov 01, 2022
Last update date Dec 10, 2024
Contact name Daniella Apelblat
E-mail(s) daniella.apelblat2@gmail.com
Organization name Weizmann Institute of Science
Department Neuroscience
Lab Spiegel
Street address Hertzl
City Rehovot
ZIP/Postal code 6451311
Country Israel
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (57)
GSM6701509 total VisCtx RNA, Dark condition, ZT0, biorep1
GSM6701510 total VisCtx RNA, Dark condition, ZT0, biorep2
GSM6701511 total VisCtx RNA, Dark condition, ZT0, biorep3
Relations
BioProject PRJNA896494

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216973_normalized_counts.xls.gz 7.1 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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