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| Status |
Public on Nov 09, 2022 |
| Title |
Longitudinal map of transcriptome changes in the Lyme pathogen Borrelia burgdorferi during tick-borne transmission |
| Organism |
Borreliella burgdorferi |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Nov 03, 2022 |
| Last update date |
Nov 12, 2022 |
| Contact name |
Seemay Chou |
| Organization name |
Chan Zuckerberg Biohub
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| Street address |
499 Illinois St, 4th Floor
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| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94158 |
| Country |
USA |
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| Platforms (2) |
| GPL24990 |
Illumina NextSeq 500 (Borreliella burgdorferi) |
| GPL32282 |
Illumina NovaSeq 6000 (Borreliella burgdorferi) |
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| Samples (22)
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| GSM6665100 |
aBb enriched from tick, 1 day after mouse attachment, rep 1 |
| GSM6665101 |
aBb enriched from tick, 1 day after mouse attachment, rep 2 |
| GSM6665102 |
aBb enriched from tick, 1 day after mouse attachment, rep 3 |
| GSM6665103 |
aBb enriched from tick, 1 day after mouse attachment, rep 4 |
| GSM6665104 |
aBb enriched from tick, 2 days after mouse attachment, rep 1 |
| GSM6665105 |
aBb enriched from tick, 2 days after mouse attachment, rep 2 |
| GSM6665106 |
aBb enriched from tick, 2 days after mouse attachment, rep 3 |
| GSM6665107 |
aBb enriched from tick, 2 days after mouse attachment, rep 4 |
| GSM6665108 |
aBb enriched from tick, 3 days after mouse attachment, rep 1 |
| GSM6665109 |
aBb enriched from tick, 3 days after mouse attachment, rep 2 |
| GSM6665110 |
aBb enriched from tick, 3 days after mouse attachment, rep 3 |
| GSM6665111 |
aBb enriched from tick, 3 days after mouse attachment, rep 4 |
| GSM6665112 |
aBb enriched from tick, 4 days after mouse attachment, rep 1 |
| GSM6665113 |
aBb enriched from tick, 4 days after mouse attachment, rep 2 |
| GSM6665114 |
aBb enriched from tick, 4 days after mouse attachment, rep 3 |
| GSM6665115 |
aBb enriched from tick, 4 days after mouse attachment, rep 4 |
| GSM6705684 |
in vitro cultured Bb, rep 1 |
| GSM6705685 |
in vitro cultured Bb, rep 2 |
| GSM6705686 |
in vitro cultured Bb, rep 3 |
| GSM6705687 |
in vitro cultured Bb enriched with aBb, rep 1 |
| GSM6705688 |
in vitro cultured Bb enriched with aBb, rep 2 |
| GSM6705689 |
in vitro cultured Bb enriched with aBb, rep 3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE216261 |
Borrelia burgdorferi gene expression from inside its tick vector during a bloodmeal |
| GSE217146 |
Borrelia burgdorferi gene expression in culture before and after antibody enrichment |
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| Relations |
| BioProject |
PRJNA897942 |
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