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| Status |
Public on Mar 21, 2024 |
| Title |
Sox17-Erg cardiac iEC reprogramming |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
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| Summary |
Bioinformatic Analyses of Sox17-Erg reprogramming
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| Overall design |
Refer to individual Series
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| Web link |
https://doi.org/10.1038/s41467-024-48354-6
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| Citation(s) |
38755186 |
| |
| Submission date |
Nov 21, 2022 |
| Last update date |
May 31, 2024 |
| Contact name |
Li Qian |
| E-mail(s) |
li_qian@med.unc.edu
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| Organization name |
UNC
|
| Department |
Department of Pathology
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| Lab |
Qian Lab
|
| Street address |
111 Mason Farm Road, MBRB
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| City |
Chapel Hill |
| State/province |
North Carolina |
| ZIP/Postal code |
27599 |
| Country |
USA |
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| Platforms (2) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL30172 |
NextSeq 2000 (Mus musculus) |
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| Samples (24)
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| GSM6744398 |
control, d7, rep2 |
| GSM6744399 |
control, w4, rep1 |
| GSM6744400 |
control, w4, rep2 |
| GSM6744401 |
se, d3, rep1 |
| GSM6744402 |
se, d3, rep2 |
| GSM6744403 |
se, d7, rep1 |
| GSM6744404 |
se, d7, rep2 |
| GSM6744405 |
se, w4, rep1 |
| GSM6744406 |
se, w4, rep2 |
| GSM6744407 |
control, rep1, H3K27ac |
| GSM6744408 |
control, rep2, H3K27ac |
| GSM6744409 |
Etv2, rep1, H3K27ac |
| GSM6744410 |
Etv2, rep2, H3K27ac |
| GSM6744411 |
SEG, rep1, H3K27ac |
| GSM6744412 |
SEG, rep2, H3K27ac |
| GSM6744413 |
neonatal, EC, rep1, H3K27ac |
| GSM6744414 |
neonatal, EC, rep2, H3K27ac |
| GSM6744431 |
D3, gene, expression |
| GSM6744432 |
D3, mulitplex |
| GSM6744433 |
D7, gene, expression |
| GSM6744434 |
D7, multiplex |
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| This SuperSeries is composed of the following SubSeries:
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| GSE218414 |
Bulk RNAseq of Day 3, Day 7, and 4 week iECs |
| GSE218415 |
H3K27ac CUT&Tag iEC reprogramming |
| GSE218417 |
scRNAseq of Sox17-Erg and Etv2 iECs at Day 3 and Day 7 |
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| Relations |
| BioProject |
PRJNA903803 |
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