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| Status |
Public on Mar 20, 2023 |
| Title |
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from embryonic E18.5 mouse heart tissue |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Analysis of steady-state mRNA levels in embryonic mouse heart tissue at E18.5 from wild-type C57BL/6, Dp16, and interferon receptor dosage-normalized Dp16^2xIFNRs mice. This dataset is part of the Human Trisome Project - Trisomy 21 Model Atlas run by the Linda Crnic Institute for Down Syndrome at the University of Colorado Anschutz Medical Campus. http://www.trisome.org/
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| |
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| Overall design |
Comparison of wild-type (n=6), Dp16 (n=6), and Dp16^2xIFNRs (n=6).
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| |
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| Contributor(s) |
Galbraith MD, Waugh KA, Sullivan KD, Espinosa JM |
| Citation(s) |
37277650 |
| |
| Submission date |
Nov 28, 2022 |
| Last update date |
Jun 08, 2023 |
| Contact name |
Matthew D Galbraith |
| Organization name |
University of Colorado Anschutz Medical Campus
|
| Department |
Pharmacology & Linda Crnic Institute for Down Syndrome
|
| Street address |
RC1-N, Mail Stop 8303, Rm. P18-6114 12800 E. 19th Ave.
|
| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (18)
|
| GSM6758240 |
Wild-type; sample 4 (E18.5 heart) |
| GSM6758241 |
Wild-type; sample 5 (E18.5 heart) |
| GSM6758242 |
Wild-type; sample 6 (E18.5 heart) |
| GSM6758243 |
Dp16; sample 1 (E18.5 heart) |
| GSM6758244 |
Dp16; sample 2 (E18.5 heart) |
| GSM6758245 |
Dp16; sample 3 (E18.5 heart) |
| GSM6758246 |
Dp16; sample 4 (E18.5 heart) |
| GSM6758247 |
Dp16; sample 5 (E18.5 heart) |
| GSM6758248 |
Dp16; sample 6 (E18.5 heart) |
| GSM6758249 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 1 (E18.5 heart) |
| GSM6758250 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 2 (E18.5 heart) |
| GSM6758251 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 3 (E18.5 heart) |
| GSM6758252 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 4 (E18.5 heart) |
| GSM6758253 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 5 (E18.5 heart) |
| GSM6758254 |
Interferon receptor dosage-normalized (Dp16^2xIFNRs); sample 6 (E18.5 heart) |
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| This SubSeries is part of SuperSeries: |
| GSE219039 |
Transcriptome analysis of interferon receptor locus dosage correction in a mouse model of Down syndrome |
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| Relations |
| BioProject |
PRJNA906083 |
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