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Series GSE21889 Query DataSets for GSE21889
Status Public on Jul 23, 2010
Title Sheep dendritic cells CD26+ and CD26- versus total dendritic cells
Organism Ovis aries
Experiment type Expression profiling by array
Summary Transcriptomic profiling of ovine skin lymph dendritic cell subsets CD26+ and CD26- compared to total enriched lymph dendritic cells.
CD26+ and CD26- dendritic cells (DC) from sheep skin lymph were sorted by flow cytometry and were analysed for their transcriptomic profile. We demonstrate that the minor sheep CD26+ skin lymph DC subset shares significant transcriptomic similarities with mouse CD8a+ and human BDCA3+ DC. This allowed the identification of a common set of phenotypic characteristics for CD8a-like DC in the 3 mammalian species, i.e. SIRPlo, CADM1hi, CLEC9Ahi, DEC205hi, XCR1hi. Compared to CD26- DC, the sheep CD26+ DC show (1) potent stimulation of allogeneic naive CD8+ T cells with high selective induction of the Ifn-gamma and Il22 genes; (2) dominant efficacy in activating specific CD8+ T cells against exogenous soluble antigen; (3) selective expression of functional pathways associated to high capacity for antigen cross-presentation.
 
Overall design Reference design (total enriched lymph dendritic cells) - Biological replicates: 2 sheep #10081 and #30066
 
Contributor(s) Schwartz-Cornil I, Dalod M
Citation(s) 20702727
Submission date May 18, 2010
Last update date Jan 16, 2014
Contact name Doulaye Dembele
E-mail(s) doulaye@igbmc.fr
Phone +33 3 88 65 35 28
Organization name IGBMC
Department Biopuces
Street address 1 rue Laurent Fries
City Illkirch
ZIP/Postal code 67400
Country France
 
Platforms (1)
GPL10427 Agilent-019921 Sheep Gene Expression Microarray (Feature Number version)
Samples (5)
GSM544243 Reference vs. Reference (self-hybridization)
GSM544244 CD26neg_30066 vs. Reference
GSM544245 CD26pos_30066 vs. Reference
Relations
BioProject PRJNA126901

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21889_RAW.tar 24.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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