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| Status |
Public on Nov 30, 2023 |
| Title |
Clostridioides difficile: R20291_pMTL84151 transconjugant (C) vs. R20291_pMTL84151-03890 (T1) |
| Platform organism |
Clostridioides difficile |
| Sample organism |
Clostridioides difficile R20291 |
| Experiment type |
Expression profiling by array
|
| Summary |
Gene expression level of Clostridioides difficile (C. difficile) strain R20291 comparing control C. difficile carring pMTL84151 as vector plasmid with C. difficile conjugated with a pMTL84151-03890 gene. Goal was to determine the effects of 03890 gene conjugation on C. difficile strain R20291 gene expression.
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| Overall design |
Two-condition experiment, C. difficile strain R20291_V vs. C. difficile strain R20291_T1. Biological replicates: 3 conjugated control replicates, 3 conjugated test-1 replicates.
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| Contributor(s) |
Gong J, Chen J, Xie S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 30, 2022 |
| Last update date |
Nov 30, 2023 |
| Contact name |
JunJia Gong |
| Organization name |
National Cheng Kung University
|
| Department |
Institute of Basic Medical Sciences
|
| Street address |
University Rd, No. 1
|
| City |
Tainan |
| ZIP/Postal code |
70101 |
| Country |
Taiwan |
| |
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| Platforms (1) |
| GPL32901 |
Agilent-067065 Clostridium difficile R20291 [Probe Name Version] |
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| Samples (6)
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| GSM6766988 |
C. difficile strain R20291_pMTL84151 transconjugant Replicate 1 |
| GSM6766989 |
C. difficile strain R20291_pMTL84151 transconjugant Replicate 2 |
| GSM6766990 |
C. difficile strain R20291_pMTL84151 transconjugant Replicate 3 |
| GSM6766991 |
C. difficile strain R20291_pMTL84151-03890 transconjugant Replicate 1 |
| GSM6766992 |
C. difficile strain R20291_pMTL84151-03890 transconjugant Replicate 2 |
| GSM6766993 |
C. difficile strain R20291_pMTL84151-03890 transconjugant Replicate 3 |
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| Relations |
| BioProject |
PRJNA906975 |
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