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Series GSE220672 Query DataSets for GSE220672
Status Public on Aug 10, 2023
Title Transcriptomic clock predicts vascular changes of prodromal diabetic retinopathy
Organism Arvicanthis niloticus
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA-Seq on fresh whole retinal vasculature from 28 Nile rats with a large dynamic range of acellular capillary density (ACD).
 
Overall design Whole retinal vasculature was used for RNA-seq.
 
Contributor(s) Peng J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 11, 2022
Last update date Aug 10, 2023
Contact name Peng Jiang
E-mail(s) p.jiang@csuohio.edu
Organization name Cleveland State University
Street address 2121 Euclid Ave
City Cleveland
State/province OH
ZIP/Postal code 44115
Country USA
 
Platforms (1)
GPL32935 Illumina HiSeq 3000 (Arvicanthis niloticus)
Samples (28)
GSM6808761 Retina.Vascular_T348M
GSM6808762 Retina.Vascular_T353M
GSM6808763 Retina.Vascular_T370M
Relations
BioProject PRJNA910951

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE220672_ExpectCounts_all_samples.txt.gz 1.3 Mb (ftp)(http) TXT
GSE220672_TPM_all_samples.txt.gz 2.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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