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| Status |
Public on Feb 08, 2024 |
| Title |
Role of ATP-dependent chromatin remodellers in regulating global gene expression in Saccharomyces cerevisiae |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We report change in the gene expression levels and this change is associated with the change in higher order folding upon deletion of ATP-dependent chromatin remodellers.
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| Overall design |
RNA was extracted from both wildtype and triple deletion (ISW1, ISW2 and CHD1) strain using acidic phenol: chloroform method, ribosomal RNA was depleted by ribozero kit, cDNA was generated by kit, and cDNA library were prepared for NGS and sequenced.
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| Contributor(s) |
Hamid Wani A, Rashid F |
| Citation(s) |
38848364 |
| |
| Submission date |
Dec 12, 2022 |
| Last update date |
Jul 01, 2024 |
| Contact name |
Ajaz ul Hamid Wani |
| E-mail(s) |
ahwani@kashmiruniversity.ac.in
|
| Phone |
9797918365
|
| Organization name |
University of Kashmir
|
| Department |
Biotechnology
|
| Lab |
Genome Organization
|
| Street address |
Hazratbal
|
| City |
Srinagar |
| State/province |
Jammu and Kashmir |
| ZIP/Postal code |
190006 |
| Country |
India |
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| Platforms (1) |
| GPL17342 |
Illumina HiSeq 2500 (Saccharomyces cerevisiae) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA911183 |
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