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| Status |
Public on Jul 12, 2024 |
| Title |
Spatial gene expression profile of the brain from WT and Sema6d-/- mice |
| Organism |
Mus musculus |
| Experiment type |
Other
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| Summary |
Sema6D is highly expressed in the brain. We used spatial transcriptional analysis to reveal the roles of Sema6D in the brain.
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| Overall design |
The brains of WT and Sema6d-/- mice were dissected and analyzed by Visium spatial transcriptomics.
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| Contributor(s) |
Nakanishi Y, Izumi M, Kang S, Kumanogoh A |
| Citation(s) |
39002542 |
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| Submission date |
Dec 13, 2022 |
| Last update date |
Oct 11, 2024 |
| Contact name |
Daisuke Motooka |
| E-mail(s) |
dry_team@ngs.gen-info.osaka-u.ac.jp
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| Organization name |
NGS core facility, Research Institute for Microbial Diseases, Osaka University
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| Street address |
3-1, Yamadaoka
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| City |
Suita |
| State/province |
Osaka |
| ZIP/Postal code |
5650871 |
| Country |
Japan |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA911569 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE220799_F4816_seq_template.xlsx |
127.7 Kb |
(ftp)(http) |
XLSX |
| GSE220799_RAW.tar |
448.5 Mb |
(http)(custom) |
TAR (of CSV, H5, JPG, MTX, PNG, TSV, ZIP) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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