NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE221264 Query DataSets for GSE221264
Status Public on Apr 01, 2023
Title Stub1 acetylation by CBP/p300 attenuates chronic hypoxia-induced pulmonary hypertension by suppressing HIF-2α transcriptional activity
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Chronic hypoxia induces pulmonary vascular remodeling and pulmonary hypertension (PH). While it is established that transcription factors, hypoxia-inducible factors (HIF-1α/HIF-2α) activate gene programs that drive hypoxia-induced PH, the mechanism of HIF-1/2 activation is less clear. Here, we report that carboxylterminus of Hsp70-interacting protein (CHIP or Stub1) modulates HIF-1α and HIF-2α transcription rather than reducing their stability. Knocking-down Stub1 reduced hypoxic activation of HIF-1α mRNA, protein, and activity while enhancing hypoxic induction of HIF-2α mRNA, protein, and target genes in pulmonary vascular cells. Mechanistically, CBP/p300-mediated acetylation of lysine (K287) inactivates the ubiquitin ligase activity of Stub1 and triggers its translocation from the cytoplasm into the nucleus. There, it recognizes the HIF promoter and hypoxia response elements (HREs) in target genes. Expression of Stub1-K287Q mutant (mimicking acetylation) enhanced hypoxia-induced HIF-1α expression, while acetyl-deficient Stub1-K287R mutant had the opposite effect on HIF-α but enhanced hypoxia-induced HIF-2α transcriptional activity. Endothelial-Stub1 transgenic mice tolerated chronic hypoxia better, had less pulmonary vascular remodeling, reduced pulmonary vascular resistance, and greater cardioprotection. Thus, Stub1 nuclear translocation enhances hypoxic induction of HIF-1α activity while suppressing deleterious effects of HIF-2α. These observations indicate that nuclear-Stub1 synergizes with HIF-1α to promote transcriptional responses and antagonizes HIF2α-driven PH in chronic hypoxia.
 
Overall design Examination of the effect of nuclear localization or exclusion of STUB1 protein on downstream gene expression.
 
Contributor(s) Afolayan A, Sidlowski P
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 19, 2022
Last update date Apr 01, 2023
Contact name Adeleye J. Afolayan
E-mail(s) aafolayan@mcw.edu
Phone 4149555634
Organization name Medical College of Wisconsin
Street address 8701 Watertown Plank Rd., PD278, CRI TBRC, Rm C3278
City Milwaukee
State/province Wisconsin
ZIP/Postal code 53226
Country USA
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (19)
GSM6857396 Endothelial Cell, Nuclear Exclusion STUB1, Replicate 1
GSM6857397 Endothelial Cell, Nuclear Exclusion STUB1, Replicate 2
GSM6857398 Endothelial Cell, Nuclear Exclusion STUB1, Replicate 3
Relations
BioProject PRJNA913791

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE221264_CHUP-hete-KO-comparison.xlsx 2.4 Mb (ftp)(http) XLSX
GSE221264_Stub1_FPKM_data_file.xlsx 3.4 Mb (ftp)(http) XLSX
GSE221264_mouse_gene_exp.diff.gz 830.9 Kb (ftp)(http) DIFF
GSE221264_smc_gene_exp.diff.gz 1.4 Mb (ftp)(http) DIFF
GSE221264_stub_nes_gene_exp.diff.gz 1.7 Mb (ftp)(http) DIFF
GSE221264_stub_nls_gene_exp.diff.gz 1.8 Mb (ftp)(http) DIFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap