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Series GSE221681 Query DataSets for GSE221681
Status Public on Dec 23, 2022
Title Bacteria hijack a neuro-immune axis in meninges to facilitate brain invasion
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The meninges are densely innervated by nociceptive sensory neurons that mediate pain and headache. How pain and neuro-immune interactions impact meningeal host defenses is unclear. Bacterial meningitis causes life-threatening infections of the meninges and central nervous system (CNS), affecting over one million people a year. Here we find that Nav1.8+ neuron signaling to immune cells in the meninges via the neuropeptide calcitonin gene-related peptide (CGRP) exacerbates bacterial meningitis. Nociceptor ablation reduced meningeal and brain invasion by two bacterial pathogens: Streptococcus pneumoniae and Streptococcus agalactiae. S. pneumoniae activated nociceptors via Pneumolysin to release CGRP, which acts through its receptor RAMP1 on meningeal macrophages to inhibit chemokine expression, neutrophil recruitment and antimicrobial defenses. Macrophage-specific RAMP1 deficiency or blockade of RAMP1 signaling enhanced immune responses and bacterial clearance in meninges and brain. Therefore, targeting a neuro-immune axis in the meninges can enhance host defenses and may be a potential treatment for bacterial meningitis.
 
Overall design For in vitro bulk RNA-seq experiments, there are 24 samples total, representing 4 biological replicates, two technical replicates, of 3 conditions at 1 time point. For in vivo scRNA-seq experiments, there are 40 samples total, representing 10 biological replicates of 4 conditions at 1 time point.
 
Contributor(s) Pinho-Ribeiro FA, Deng L, Neel DV, Erdogan O, Basu H, Yang D, Choi S, Walker AJ, Carneiro-Nascimento S, He K, Wu G, Stevens B, Doran K, Levy D, Chiu I
Citation(s) 36859544
Submission date Dec 23, 2022
Last update date Mar 17, 2023
Contact name Felipe Almeida de Pinho Ribeiro
E-mail(s) dfelipe@wustl.edu
Phone 8572658909
Organization name Washington University in St Louis
Street address 4515 McKinley Ave
City St Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (31)
GSM6893026 Invitro_BMDM_Vehicle_1_L1
GSM6893027 Invitro_BMDM_Vehicle_1_L2
GSM6893028 Invitro_BMDM_Vehicle_2_L1
Relations
BioProject PRJNA915369

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE221681_StrepCGRP_filtered_feature_bc_matrix.h5 36.0 Mb (ftp)(http) H5
GSE221681_Strep_filtered_feature_bc_matrix.h5 33.4 Mb (ftp)(http) H5
GSE221681_Vehicle_filtered_feature_bc_matrix.h5 30.3 Mb (ftp)(http) H5
GSE221681_filtered_feature_bc_matrix.h5 32.8 Mb (ftp)(http) H5
GSE221681_tx2gene.rda.gz 1.2 Mb (ftp)(http) RDA
GSE221681_txi.rda.gz 52.5 Mb (ftp)(http) RDA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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