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Series GSE22211 Query DataSets for GSE22211
Status Public on Jul 06, 2010
Title Genome-wide nucleosome position data for 12 yeast species
Organisms Lachancea waltii; Saccharomyces bayanus; Saccharomyces cerevisiae; Yarrowia lipolytica; Debaryomyces hansenii; Candida albicans; Nakaseomyces glabratus; Naumovozyma castellii; Saccharomyces paradoxus; Kluyveromyces lactis; Saccharomyces mikatae; Lachancea kluyveri NRRL Y-12651
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We mapped nucleosome positions genome-wide in 12 Ascomycetes
Overall design Illumina sequencing of mononucleosomal DNA isolated from mid-log cultures grown in rich medium (abbreviated CM, in house recipe)
Contributor(s) Tsankov A, Rando O, Regev A
Citation(s) 20625544
Submission date Jun 08, 2010
Last update date May 15, 2019
Contact name Alex M Tsankov
Phone 6172532442
Fax 6172532442
Organization name MIT
Street address 155 Bay State
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (12)
GPL9131 Illumina Genome Analyzer (Naumovia castellii)
GPL9133 Illumina Genome Analyzer (Candida albicans)
GPL9134 Illumina Genome Analyzer (Saccharomyces cerevisiae)
Samples (13)
GSM552907 Saccharomyces mikatae genome-wide nucleosome data
GSM552908 Saccharomyces bayanus genome-wide nucleosome data
GSM552909 Saccharomyces castellii genome-wide nucleosome data
This SubSeries is part of SuperSeries:
GSE21960 The role of nucleosome positioning in the evolution of gene regulation
SRA SRP002812
BioProject PRJNA128881

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22211_RAW.tar 344.4 Mb (http)(custom) TAR (of TXT, WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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