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| Status |
Public on Sep 06, 2010 |
| Title |
Expression data of Soybean (Glycine max) roots from different iron treatments. |
| Organism |
Glycine max |
| Experiment type |
Expression profiling by array
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| Summary |
Two Near Isogenic soybean (Glycine max) lines were grown in hydroponic conditions with either 50uM ferric nitrate or 100uM ferric nitrate. After 10 days, half the plants were harvested (total root tissue). At 12 days after planting, iron was added to plants grown in low iron conditions bringing them up to sufficient iron growth conditions. Root tissue was harvested for the remaining plants at 14 days after planting.
Gene expression analysis from root tissue of two Near Isogenic Lines (NILs), Clark (PI548553) and IsoClark (PI547430), grown in iron stress or iron stress recovered conditions.
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| Overall design |
A total of 24 samples from four growth conditions, three biological replicates per treatment
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| Contributor(s) |
Vance CP, Shoemaker RC, Stupar RM, O'Rourke JA, Bucciarelli B |
| Citation(s) |
20656899 |
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| Submission date |
Jun 08, 2010 |
| Last update date |
Nov 22, 2016 |
| Contact name |
Carroll P Vance |
| E-mail(s) |
vance004@umn.edu
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| Phone |
612-625-5715
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| Organization name |
USDA-ARS, University of Minnesota
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| Department |
Agronomy and Plant Genetics
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| Lab |
Vance
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| Street address |
1991 Upper Buford Circle, 411 Borlaug Hall
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| City |
St. Paul |
| State/province |
MN |
| ZIP/Postal code |
55108 |
| Country |
USA |
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| Platforms (1) |
| GPL4592 |
[Soybean] Affymetrix Soybean Genome Array |
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| Samples (24)
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| GSM553507 |
Iso 10DAP, Fe limited, biological rep 1 |
| GSM553508 |
Iso 10DAP, Fe limited, biological rep 2 |
| GSM553509 |
Iso 10DAP, Fe limited, biological rep 3 |
| GSM553510 |
Iso 10DAP, Fe sufficient, biological rep 1 |
| GSM553511 |
Iso 10DAP, Fe sufficient, biological rep 2 |
| GSM553512 |
Iso 10DAP, Fe sufficient, biological rep 3 |
| GSM553513 |
Clark 10DAP, Fe limited, biological rep 1 |
| GSM553514 |
Clark 10DAP, Fe limited, biological rep 2 |
| GSM553515 |
Clark 10DAP, Fe limited, biological rep 3 |
| GSM553516 |
Clark 10DAP, Fe sufficient, biological rep 1 |
| GSM553517 |
Clark 10DAP, Fe sufficient, biological rep 2 |
| GSM553518 |
Clark 10DAP, Fe sufficient, biological rep 3 |
| GSM553519 |
Iso 14DAP, Fe recovery, biological rep 1 |
| GSM553520 |
Iso 14DAP, Fe recovery, biological rep 2 |
| GSM553521 |
Iso 14DAP, Fe recovery, biological rep 3 |
| GSM553522 |
Iso 14DAP, Fe sustained, biological rep 1 |
| GSM553523 |
Iso 14DAP, Fe sustained, biological rep 2 |
| GSM553524 |
Iso 14DAP, Fe sustained, biological rep 3 |
| GSM553525 |
Clark 14DAP, Fe recovery, biological rep 1 |
| GSM553526 |
Clark 14DAP, Fe recovery, biological rep 2 |
| GSM553527 |
Clark 14DAP, Fe recovery, biological rep 3 |
| GSM553528 |
Clark 14DAP, Fe sustained, biological rep 1 |
| GSM553529 |
Clark 14DAP, Fe sustained, biological rep 2 |
| GSM553530 |
Clark 14DAP, Fe sustained, biological rep 3 |
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| Relations |
| BioProject |
PRJNA128869 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE22227_RAW.tar |
130.4 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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