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Series GSE22378 Query DataSets for GSE22378
Status Public on Jun 17, 2010
Title Analysis of micorRNA expression during the HBV acute and chronic infections
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Recent implication of microRNAs (miRNAs) in the intricate cross-talk between the host and the pathogen in viral infections reveals a new layer of mechanism for host-virus interactions. In the present study, we investigated human miRNAs which may be involved in the acute and chronic HBV infections via microarray profiling. We determined the global miRNA expression profiles elicited in the uninfected control model (HepG2), the acute infection model (HepG2 transfected with a 1.3 full-length HBV genome) and the chronic infection model (HepG2.2.15) using CapitalBio corporation’s mammalian miRNA arrays.
 
Overall design Three cellular models were used in this study: the human hepatoblastoma cell line HepG2 as a blank control representing the condition without virus infection; HepG2 transfected with a 1.3 full-length HBV genome as an acute infection model; and HepG2.2.15, a well-established cell line derived from HepG2 transfected with a full-length HBV genome and constitutively expressing HBV, as a chronic infection model.
 
Contributor(s) Zhang Z, Liu X, Wang D, Teng M, Niu L, Liang Z, Huang A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 16, 2010
Last update date Mar 22, 2012
Contact name Wei Lan
Organization name University of Science and Technology of China
Department School of Life Science
Street address 96#, Jinzhai Road
City Hefei
State/province Anhui
ZIP/Postal code 230027
Country China
 
Platforms (1)
GPL8469 Capitalbio mammal microRNA V3.0
Samples (12)
GSM556720 normal.1
GSM556721 normal.2
GSM556722 normal.3
Relations
BioProject PRJNA127645

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22378_RAW.tar 1.6 Mb (http)(custom) TAR (of LSR)
Processed data included within Sample table

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