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Series GSE223857 Query DataSets for GSE223857
Status Public on Jan 31, 2023
Title miR-197-3p promotes osteosarcoma stemness and chemo-resistance by inhibiting SPOPL
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary First-line treatment for osteosarcoma includes chemotherapy and surgery. However, the five-year survival rate of refractory osteosarcoma remains unsatisfactory. Osteosarcoma cancer stem cells, possessing stemness and chemoresistance, are one of the critical causes for poor response to chemotherapy. Elucidating regulatory signaling pathways of osteosarcoma cancer stem cells may provide a rationale for improving regimens against chemoresistant osteosarcoma. Methotrexate (MTX)-resistant osteosarcoma cells were established. microRNA expression profiles were used for detecting differentially expressed microRNA in resistant clones and the parental cells. microRNA target databases were employed to predict potential microRNA and mRNA interaction. Flow cytometry was performed to measure stem cell marker Prominin-1 (CD133) positive cells. Im-munofluorescence staining was applied to detect CD133 expression. miR-197-3p mimic or an-ti-miR-197-3p stably transfected cells were used to generate xenograft models. In the study, we found miR-197-3p was increased in MTX-resistant cell lines. Overexpression of miR-197-3p en-hanced the expression of cancer stem cell markers CD133, Octamer-binding protein 4 (OCT4), Transcription factor SOX-2 (SOX2), and Homeobox protein NANOG (NANOG), as well as chemoresistance-associated genes ATP-dependent translocase ABCB1 (ABCB1) and Broad substrate specificity ATP-binding cassette transporter ABCG2 (ABCG2), whereas miR-197-3p knockdown inhibited stemness and recovered sensitivity to MTX. We also classified the tumor suppressor Speckle-type POZ protein-like (SPOPL) as a target of miR-197-3p. The miR-197-3p mutation that cannot combine SPOPL promoter regions was unable to sustain stemness or chemoresistance. Collectively, we discovered miR-197-3p conferred osteosarcoma stemness and chemotherapy resistance by targeting SPOPL, prompting promising therapeutic candidates for refractory oste-osarcoma treatment.
miRNA qPCR assay
 
Overall design MicroRNA (miRNA) were enriched and purified by miRNeasy Micro Kit (catalog: 217084, QIAGEN, Hilden, Germany), followed by cDNA synthesis with miRCURY LNA RT Kit (catalog: 339340, QIAGEN). miRCURY LNA miRNA Custom PCR Panels (catalog: 339330, QIAGEN) were then used to investigate differentially expressed miRNA in the parental U2OS cells and MTX-resistant U2OS cells.
 
Contributor(s) He M
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Submission date Jan 27, 2023
Last update date Jan 31, 2023
Contact name Ming He
E-mail(s) topminghe56@outlook.com
Organization name Shengjing Hospital of China Medical University
Street address No. 36 Sanhao Street
City Shenyang
State/province Liaoning
ZIP/Postal code 110004
Country China
 
Platforms (1)
GPL33063 Qiagen Custom miScript miRNA PCR Arrays
Samples (6)
GSM6998017 U2OSr-1
GSM6998018 U2OSr-2
GSM6998019 U2OSr-3
Relations
BioProject PRJNA928683

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223857_data_sheets.xlsx 38.5 Kb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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