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Series GSE224390 Query DataSets for GSE224390
Status Public on Oct 10, 2023
Title AhR promotes dedifferentiation in MYCN amplified neuroblastoma [ATAC-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Neuroblastoma cell lines (Kelly, BE2C) were subject to chromatin profiling by ATAC-seq
ATAC-seq analysis of Neuroblastoma cell lines +/- shAhR knockdown
 
Overall design Anna, Bianchi-Smiraglia
 
Contributor(s) Long M
Citation(s) 38026169
Submission date Feb 02, 2023
Last update date Dec 06, 2023
Contact name Mark D Long
E-mail(s) mark.long@roswellpark.org
Organization name Roswell Park Comprehensive Cancer Center
Department Bioinformatics & Biostatistics
Street address Elm & Carlton Streets
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (18)
GSM7021586 Kelly-PLKO-1-1
GSM7021587 Kelly-PLKO-1-2
GSM7021588 Kelly-PLKO-1-3
This SubSeries is part of SuperSeries:
GSE224391 AhR promotes dedifferentiation in MYCN amplified neuroblastoma
Relations
BioProject PRJNA930762

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224390_RAW.tar 6.4 Gb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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