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Status |
Public on Oct 26, 2023 |
Title |
Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification [ATAC-seq] |
Organism |
Drosophila melanogaster |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
To investigate the chromatin state into an adult stem cell lineage, we generate cell-type specific chromatin state maps in the adult Drosophila intestine and identify principal chromatin state transitions during lineage determination. we profiled the binding sites of five chromatin-associated proteins from which the previously described five major types of chromatin.
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Overall design |
Comparative chromatin accessibility (ATAC-seq) as well as gene expression (RNA-seq) in Drosophila ISC/EB in control and H1 RNAi conditions
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Contributor(s) |
Josserand M, Rubanova N, Gervais L, Bardin AJ |
Citation(s) |
38056452 |
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Submission date |
Feb 09, 2023 |
Last update date |
Jan 25, 2024 |
Contact name |
Allison Bardin |
E-mail(s) |
allison.bardin@curie.fr
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Organization name |
Institut Curie
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Street address |
26 rue d'Ulm
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City |
Paris |
ZIP/Postal code |
75005 |
Country |
France |
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Platforms (1) |
GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
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Samples (6)
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This SubSeries is part of SuperSeries: |
GSE224967 |
Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification |
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Relations |
BioProject |
PRJNA933191 |